| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2371 |
|---|
| Symbol | |
|---|
| ID | 8020035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2493442 |
|---|
| End bp | 2494374 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644831153 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_002982316 |
|---|
| Protein GI | 241663956 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.599012 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGCT CCGATGTGCT TGAACTCCTC ACCCTCGCTG CCCTGTGGGG CGGCTCTTTC
CTGTTCATGC GCGTTGCCGC GCTGCCCTTC GGACCGGTTG CATTGATCGC GTTGCGGGTG
GCCATCGCCT CGTGCTTCCT CGTTCCGACG CTGGCCTTGC GCGGCGGCAT GGGCGCGCTG
CGCACGCACT GGCCGCATCT GCTGGCGGTG GGCGTGCTGA ATTCGGCCAT CCCGTTCTGC
CTGTTCGCCT ATGCCGAACT GACACTCACG GCGGGGTTCA CCTCGGTGCT CAACGCCGCG
GCCCCGCTGT TTGCGGCCAT CGTCGCCTTC ACCTGGCTGG GTGAGCGGAT GTCGTCGCTG
CGCGTGCTGG GATTGGCGAT CGGCTTTGTC GGCGTGATCG TGCTGGTCGG CGGGTCGTCT
GTCATCGACG CAAAGCAGGG CGGCGTGGCG GTGGCTGCAG CGCTGTCGGC CACCGTGCTG
TACGGCGTGG CGAGCAGCTA CACCAAGCGT TTCCTGACCG GCGTACCGCC GCTGGCCGTG
GCGACCGGCA GCCAAGTGGC CGCCACCATC GTGCTTGCAC CGCTGGCCTA CTGGCTGTGG
CCGGCGCAGA CGCCCACCGG CAGCGTGTGG CTGCACGTCA TCGCGCTGGG CATTGCATGC
ACGGGCGTCG CCTACATCCT CTTCTTCCGC CTTGTTGCGC ATGTGGGCCC GACGCGCGCG
GTGTCGGTCA CTTTCCTGAT CCCGGTATTC GGTGTGCTGT GGGGCATCCT GTTCCTGGGC
GAGCAACTGA CGTTGAACAT GGTGATTGGC TGCGCCGTGA TCCTGCTAGG GACGTCGCTG
TCGACCGGCG TGTTCGCACC CGGCAAAAAA GCAGTTGCAA ATGGCACCAC CCCGGCAAGC
GATAAAGATT CGCTCTTGCG TTCGGGCCGC TGA
|
|---|
| Protein sequence | MRRSDVLELL TLAALWGGSF LFMRVAALPF GPVALIALRV AIASCFLVPT LALRGGMGAL
RTHWPHLLAV GVLNSAIPFC LFAYAELTLT AGFTSVLNAA APLFAAIVAF TWLGERMSSL
RVLGLAIGFV GVIVLVGGSS VIDAKQGGVA VAAALSATVL YGVASSYTKR FLTGVPPLAV
ATGSQVAATI VLAPLAYWLW PAQTPTGSVW LHVIALGIAC TGVAYILFFR LVAHVGPTRA
VSVTFLIPVF GVLWGILFLG EQLTLNMVIG CAVILLGTSL STGVFAPGKK AVANGTTPAS
DKDSLLRSGR
|
|---|
| |