Gene Rpic12D_2360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2360 
Symbol 
ID8020024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2482774 
End bp2483184 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content60% 
IMG OID644831142 
ProductDoxX family protein 
Protein accessionYP_002982305 
Protein GI241663945 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.413665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.233009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAT TCATTCAACG CTGGCGCGAC GAGTTGATCT TGCTCGGTCG TGTGCTGATG 
ATGCTGCTGT TCTTGATTTC CGGCTGGGGC AAGCTTACCG GCTTCCAGGG CACCGTCGGC
TACATGGGGA CGGTCGGTGC GCCCATGCCG GTAGTAGCGG CCGCCATCGC AGTCGTCATG
GAATTTGGCG TGGGGATTGC CCTGTTGATC GGCTTCTGGA CCCGACCGCT GGCGCTGTTG
ATGGCGCTTT TCGTGCTGGG CACTGCGCTG ATCGCCCATA CGTTCTGGAA CGTCGAAGGC
GCCATGCAGA CTGCCAATAT GGTTCAGTTC TACAAGAACC TCAGCATCAT GGGCGGGCTA
CTGTTACTTG CCGTGACGGG GGCCGGACGG TACGCGTTGC AGAAGTCGTA G
 
Protein sequence
MDAFIQRWRD ELILLGRVLM MLLFLISGWG KLTGFQGTVG YMGTVGAPMP VVAAAIAVVM 
EFGVGIALLI GFWTRPLALL MALFVLGTAL IAHTFWNVEG AMQTANMVQF YKNLSIMGGL
LLLAVTGAGR YALQKS