| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2357 |
|---|
| Symbol | |
|---|
| ID | 8020021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2479196 |
|---|
| End bp | 2480161 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644831139 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002982302 |
|---|
| Protein GI | 241663942 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0418601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.167767 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGC GCCAGATTGA AGTTTTCCGC GCCGTGATGC TGGTCGGGAC CGTCAGCGAG
GCGGCGCGCA TGCTGAACGT GTCGCAGCCC GTGGTGACGC GTGTGCTGCA GCACACCGAG
CTGCAACTCG GCTTCCGCCT GTTTGACCGC ACCAAGGGCC GCCTGCAGCC CACCGCGGAG
GCGTTCGAAC TGTTCAGCGA AGTCGAGCGG CTGTATCAGG AGGTCGAGCG CGTGCGGCGC
GTGTCGGCCA ATCTGCGTCA CAAGGGCGCC GGGCGCTTGC GCGTGGCGGC AACGCCCAGC
CTGGCCCCAA GCATCCTCGC GCCTGCCGTG CGGCGTTTCT CGCAGCGTCA CCCCGATACG
CTGGTGCGCG TGTTCACGCA CCACACCGCT GAAATCGTGC AGGGCCTGCT CTCGCAGGAC
ATCGACGTCG GTTTTGCCTT TGCGCCGCCC GTGCATCCGG CCATCAGCAC CACGCCGGTC
GCCCAGGGCC GCATCCTCCT GGCCGCGCCG CGCGCCTGGG TGGGCGGCAA GACGGACGGC
CGCGCGCTGC ATAAGCTCGT TGCCGAGAAG CCGTTTATCG GACTGGAAGA CCAGATCTCG
CTTGGCTCGC TGGTCGGGCA GACGCTGGCG CGCGGCGGGC TGGCGCCGCA GTCGACGCTG
GAAGTGCAGA CGTATTCGTT GGCGCGTTCG CTGGTGGAGG AGTCGCTCGG CGTGACGATG
CTCGATCAGT TCACGGCCGC CACCGGCAGC ATGGAGCGCA TCGCGCTGTT CGCGCTGGAG
CCCGCGCAGA CATTCGATGT GCGCGCCATG CGTGCCGAGC ATCATGCGCC GTCATCGTTG
GCGGATAGCC TCGTGCAGTG CTTTGCCGAA GCCGCACGTG CGTTGTCCGA TGAACTTCCA
CAGCGCGTCG AGCCGACCGC ATTTGTGCTC AAGCCCACCG AACCTGACAG CGACGCAGCA
GACTAA
|
|---|
| Protein sequence | MRLRQIEVFR AVMLVGTVSE AARMLNVSQP VVTRVLQHTE LQLGFRLFDR TKGRLQPTAE
AFELFSEVER LYQEVERVRR VSANLRHKGA GRLRVAATPS LAPSILAPAV RRFSQRHPDT
LVRVFTHHTA EIVQGLLSQD IDVGFAFAPP VHPAISTTPV AQGRILLAAP RAWVGGKTDG
RALHKLVAEK PFIGLEDQIS LGSLVGQTLA RGGLAPQSTL EVQTYSLARS LVEESLGVTM
LDQFTAATGS MERIALFALE PAQTFDVRAM RAEHHAPSSL ADSLVQCFAE AARALSDELP
QRVEPTAFVL KPTEPDSDAA D
|
|---|
| |