Gene Rpic12D_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2339 
Symbol 
ID8020003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2463016 
End bp2463588 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content66% 
IMG OID644831122 
Productprotein of unknown function DUF218 
Protein accessionYP_002982285 
Protein GI241663925 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.196018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTCG GTCGTTCGAC AGTTCGCGGT GTCCTCGCCT GGATTGGCGG TTGCGCCATC 
GTTGCAATGG CGTTCAGCGC CGTGCTCGTC TGCGGGGCCA AGAGTTGGTT GCGCGAGGAG
CCCAGGCTTG CACACGCCGA CGTGATCGTC GTGCTGGGCG GCGAATCGGG TCAGCGCGTA
ATTGGCGCGG CCGAGCTGTA CCACGCAGGC GCGGCGCCCC GCGTGTTCGT GAGCGGGCAG
GGCGATTGCC TGCTGATCGA ACGTCGCTTG GTGATGGCGG GTGTGCCCGC AGGGCGCATC
GGCCACGAAT GTGTGTCAGG CAGCACGATG GAAAATGCGC GGATGACGCG CCAGACGCTA
GCGGGCCAGC AGGTGCAAAG CGCAATACTG GTCACGAGCT GGTATCACAC CGGCCGGGCG
CTGGCCGTGT TCCGCAAGGT GTGGCCGGAA ATCACGTGGG GTGCGCAGGG CGTATTCCCG
GGCGACACGC TGGCCAAGTC GGTGCCGGTC TACGAAGCCG GGTCGATTCT TGCCGAGTAC
GTAAAGCGGG CGTGGTACGC CGTGCGCTAC TGA
 
Protein sequence
MVFGRSTVRG VLAWIGGCAI VAMAFSAVLV CGAKSWLREE PRLAHADVIV VLGGESGQRV 
IGAAELYHAG AAPRVFVSGQ GDCLLIERRL VMAGVPAGRI GHECVSGSTM ENARMTRQTL
AGQQVQSAIL VTSWYHTGRA LAVFRKVWPE ITWGAQGVFP GDTLAKSVPV YEAGSILAEY
VKRAWYAVRY