| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2336 |
|---|
| Symbol | |
|---|
| ID | 8020000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2458120 |
|---|
| End bp | 2459118 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644831119 |
|---|
| Product | bifunctional riboflavin kinase/FMN adenylyltransferase |
|---|
| Protein accession | YP_002982282 |
|---|
| Protein GI | 241663922 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0196] FAD synthase |
|---|
| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase
[TIGR00125] cytidyltransferase-related domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.532241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.131688 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGTCT TTCGCGGCCT GCCCAACGCC GAAAGTCGCG CGCCCTGCGC GTTGACCATC
GGCAACTTCG ACGGCGTGCA CCGCGGGCAC CAGTCTCTGC TGGCCCGCGC ACGCGCGGCG
GCCGATGCAC GCGGATTGCC GCTCACGGTG ATGACGTTCG AGCCGCATCC GCGCGAATTC
TTCATGCCGG ACCGCGCGCC CACCCGCATC GCCCTGCTGC GCGACAAGCT GGAAAGCCTG
CGCCGCCAGG GCGTCGACCG CGTGGTCGTG GAGCATTTCA ACGCGCATTT CGCCGGGCAG
ACGCCCGACG AGTTCGTGCG CAATGTTTTG GTGGATGGCC TGCACACGCG CTGGCTGCTG
GTGGGCGATG ATTTCCGCTT CGGCGCCAAG CGCGCCGGCG ATTTCGCTTA TCTCCAGGCC
GCTGGTGCCC AGTTCGGCTT CGAAGTCGAG CAGATGGGCT CGGTGTCGGA GTCCGGCGTG
CGCATCTCCA GTTCCGCCGT GCGCGAGGCG CTGGCCGCCG GTGACCTGGA ACATGCCCGC
CGCCTGCTCG GTCACGGTTA TGCCATCAGC GGGCACGTGG TGCACGGGCA AAAGCTCGGC
CGCTCGCTCG GCTTCCCGAC GCTGAATCTG CGCATCTCGC ACCGCAGGCC GGCGGTGGCC
GGCATCTTTG TCGTGCAGGT GCACGGGCTG GCCGAAAAAC CGCTGCCGGC CGTCGCCAGC
ATTGGCGTAC GCCCGACGGT GGACGACTCC GGCCGCGTGC TGCTGGAAGT GCATATCTTC
GATTACCAGG CCAATGTCTA CGGCAAGCTT GTCCGCGTGG AATTCATGAA GAAGCTGCGC
GACGAGGCTC GCTACGATTC GCTCGATGCG CTCAAGGACG CCATCGCGCA GGACTGTGTT
CATGCGCGGC AGTTCTTCGG CCTGGCCGTT CCGCCGGCCG GCGAGTCTCC AACGCTTCGG
CGCGACTTCG CCACCTCCGC CACCGACCGA ATTCAGTAG
|
|---|
| Protein sequence | MKVFRGLPNA ESRAPCALTI GNFDGVHRGH QSLLARARAA ADARGLPLTV MTFEPHPREF
FMPDRAPTRI ALLRDKLESL RRQGVDRVVV EHFNAHFAGQ TPDEFVRNVL VDGLHTRWLL
VGDDFRFGAK RAGDFAYLQA AGAQFGFEVE QMGSVSESGV RISSSAVREA LAAGDLEHAR
RLLGHGYAIS GHVVHGQKLG RSLGFPTLNL RISHRRPAVA GIFVVQVHGL AEKPLPAVAS
IGVRPTVDDS GRVLLEVHIF DYQANVYGKL VRVEFMKKLR DEARYDSLDA LKDAIAQDCV
HARQFFGLAV PPAGESPTLR RDFATSATDR IQ
|
|---|
| |