Gene Rpic12D_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2333 
SymbolpurN 
ID8019997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2454282 
End bp2454932 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content63% 
IMG OID644831116 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_002982279 
Protein GI241663919 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.213803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.274367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA TCGTCATTCT CATTTCCGGA CGCGGCTCCA ATATGGAAGC CATTGTCCGC 
GCCTGTCAGG CCGAAGGTTG GTCGGGACGC ATTGCCGCCG TCATTTCTAA TCGGCCCGAA
GCGGCGGGAC TTAAATTTGC CGCTTCGCAC GGCATTGCTA CCGCGGTGGT CGACCACAAG
GCCTTCCCCG ATCGGGACAG CTTCGAGGCC GCCCTGGCGC AGGTGATCGA CGGCTTTTCG
CCTGATCTCG TGGTGCTGGC CGGTTTCATG CGCATCCTTA CGCCCGGCTT TGCAAAGCGC
TACGCGGGCC GCATGCTGAA CATTCACCCG TCTCTGCTGC CGTGCTTCCC TGGTTTGCAT
ACGCACGAGG CCGCGCTGGC CATGGGGGTG AAGGTGCATG GCGCGACAGT GCACTTCGTC
ACCGCTGACC TGGACCACGG CCCGATCGTG CTGCAGGCCA TCATCGACGT GCGTCAGGAC
GACACGCCCG ACTCGCTGGC CGGGCGGCTG CTGGCACAGG AACACACGAT TTACCCGCGT
GCCGTGCGCT GGTTCGTGGA AGGGCGGTTG TCGATCGAAG ACGGCGTTGT GCGCGTCTCG
CCGGATGAAT CGCAGCTTGT CATTGGCGTC AACGCCCGGG AGGCAGCATG A
 
Protein sequence
MKNIVILISG RGSNMEAIVR ACQAEGWSGR IAAVISNRPE AAGLKFAASH GIATAVVDHK 
AFPDRDSFEA ALAQVIDGFS PDLVVLAGFM RILTPGFAKR YAGRMLNIHP SLLPCFPGLH
THEAALAMGV KVHGATVHFV TADLDHGPIV LQAIIDVRQD DTPDSLAGRL LAQEHTIYPR
AVRWFVEGRL SIEDGVVRVS PDESQLVIGV NAREAA