Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2330 |
Symbol | |
ID | 8019994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2450920 |
End bp | 2452296 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644831113 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_002982276 |
Protein GI | 241663916 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.194216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.152351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGAT TGCCGCTAAA CCTGAATCAC ATTGCGCTGG GCCACATGAT CGACGACATC GTCCGCGATC TGGGTGGCCC GCGCTTTATC TGGCAACTGG GCGTGCTGAT ACTGGTGCTC GGTGCCGCCT GGCTGCTGGC GCGGCCGATC TCGCGGCGCC TGCATTCGGC GCACGTGAAC GAGACCTTCG CCCTGCGTTT TGCCTGGTCC AGCCTGGAGC GGGCGATGTT CCCGCTGATC GGCTGGCTGC TGGTGGTGGG CGCGCGCTAT GCGCTGGTCG GCACCATGCC GATCAGCGTG TTCCGGCTGG CCGCGGTGCC GCTGTTTGGC CTGGCGATCC TGTATCTCGG CTTCTACGTG TTGCGCCGCG TGCTGTCGGC TAACGGCGAG CTGCACGGCA TGCTCGTCCT CGCGGAGCGC GTGCTCACCA CGCTGATGTG GATCGGCATG GTGCTCTACG TGCTGGGCGT GCTCGGCGAT GTGGTGGATT ACCTCGACGG CATCCGCTTT GCGCTGGGTG GCAAGCAGAA GGTGAGCCTG GCGGCCATGC TGATGGGCGT GGTGTGGATT CTCGTCACTG TGCTGGTGGC GATGTGGTTC GGCTCGTGGC TGGATAGCCG CATCACGCGT GCTTCCGCGA TCGATGCCAA CCTGAAGGTG GTGTTGTCGC GTGTGACCAA GGCGGTGCTG CTGCTGGTGT CGCTGCTGCT GAGCCTCTCG CTGGTGGGCA TCGACCTGAC GGTGCTGTCG GTGTTTGGCG GCGCGCTTGG CGTCGGCCTG GGTTTCGGCT TGCAAAAGAT CGCCAGCAAT TACGTTTCGG GCTTCATCAT CCTGCTGGAG CGCTCGCTCA AGCTGGGCGA TCAGATTACC GTCAGCACGT ACACCGGCAT CGTCACGCAG ATCCGCACCC GCTACACCGT CGTGCGCAAT GGCGACGGCG ATACGCTCGT CCCGAACGAA CTGATGGTCG CGCAGGCCGT TCAGAACCAC AACGAGCGCG GCACCGTGCG TGTGGCGGTG CGCGTGCAGG CGTCGTATGA CGCTGATCCT GAAAGCGTGC TGGCGTTGCT GCTGCAATGT GCAGAGGGCA TCCCGCGTGT TCTGCCCGAA CCGGCGCCCG CCGCCTTCAT GGCCCTGTTC GCCGACAGCG GCATCGAATA TGAGCTTGGC GTCTGGATCG GCGATCCGCA TAACGGCAAG CTGGGCGTGC AGTCCGACCT GAACCGCGCG ATTTACCGTC GCTTCAAGGA AGCAGGCATC GATATCCCCT ACCCGCAGCG GGAAGTGCGT GTGCTTGGGG CGTCGGCGCT GCAACAGGGC GTCACGCGCA CTTTGAGTGA TGTAACAGCC CCATCCACGC CATCACTGTC GGACTAA
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Protein sequence | MNGLPLNLNH IALGHMIDDI VRDLGGPRFI WQLGVLILVL GAAWLLARPI SRRLHSAHVN ETFALRFAWS SLERAMFPLI GWLLVVGARY ALVGTMPISV FRLAAVPLFG LAILYLGFYV LRRVLSANGE LHGMLVLAER VLTTLMWIGM VLYVLGVLGD VVDYLDGIRF ALGGKQKVSL AAMLMGVVWI LVTVLVAMWF GSWLDSRITR ASAIDANLKV VLSRVTKAVL LLVSLLLSLS LVGIDLTVLS VFGGALGVGL GFGLQKIASN YVSGFIILLE RSLKLGDQIT VSTYTGIVTQ IRTRYTVVRN GDGDTLVPNE LMVAQAVQNH NERGTVRVAV RVQASYDADP ESVLALLLQC AEGIPRVLPE PAPAAFMALF ADSGIEYELG VWIGDPHNGK LGVQSDLNRA IYRRFKEAGI DIPYPQREVR VLGASALQQG VTRTLSDVTA PSTPSLSD
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