Gene Rpic12D_2321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2321 
Symbol 
ID8019985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2443458 
End bp2443946 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content64% 
IMG OID644831104 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_002982267 
Protein GI241663907 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00489912 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCAAAATT TGGTGAACGA GGCGTCCGCG GCGACGCCAA GCGGCGCAGG CAAGGTGGTC 
GGCCCGGATT CCTTTCTGAC GCTGCACTAC CGCATCGCGC TGGAAAACGA CACGGACATC
GTCACCACCT TCGACGACAA GCCGGCAACG CTGCTGCTCG GCCAAGGGCA GATGGCGCCC
ACGCTGGAGC AGGCACTGCT CGGTATGCGC GAAGGCGAGC GCACGACGTT CCGCCTGGCT
CCCGAGCACG CGTTCGGCCC CCGCAATCCT GAACTGCTGC AGCGGGTGTC GCTGGCCACG
CTGCGCGAAA ACTCGTCGTT CGAAGAGGAT TACCAGCCGG GCGACCTGGT TGAGTTCAAT
GCGCCGAGCG GCGGCAAATA TGCCGGTGTG CTCAAGGAAG TGGGCGAGAC CTCGGCACTG
TTCGACTTCA ACCACCCGCT GGCCGGCCAG ACGATCGTGT TTGAAGTCCA GCTGATCGGC
ATCCTCTGA
 
Protein sequence
MQNLVNEASA ATPSGAGKVV GPDSFLTLHY RIALENDTDI VTTFDDKPAT LLLGQGQMAP 
TLEQALLGMR EGERTTFRLA PEHAFGPRNP ELLQRVSLAT LRENSSFEED YQPGDLVEFN
APSGGKYAGV LKEVGETSAL FDFNHPLAGQ TIVFEVQLIG IL