| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2320 |
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| Symbol | ispH |
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| ID | 8019984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2442473 |
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| End bp | 2443456 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644831103 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_002982266 |
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| Protein GI | 241663906 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00577615 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAACG CTGTGAACGC CCCGCTCGAT CCCATTGATC CTGTCACCCA GGCCGACGCC
GAGGTTTTGC TGGCGCAGCC GCGCGGTTTC TGCGCCGGCG TGGATCGCGC CATCGAGATC
GTCGAGCGCG CGCTGGAGTT GTTCGGCGCG CCGATTTACG TTCGTCACGA GATCGTGCAC
AACGCCTATG TGGTTGGCGA TCTGCGCAAC AAGGGCGCGG TGTTCGTGCA GGAACTCGAC
GATGTGCCGG TGGGTGGCAC GGTCATTTTC AGTGCGCACG GTGTGTCGCG GGCGGTGCGT
GAGGCGGCGG AGGCGCGCGG CTTGCGCGTG TTCGATGCGA CCTGCCCGCT GGTGACCAAG
GTGCACGTGG AAGTCTCGAA GATGCGTGCG CAGGGTTTCG AGATCATCAT GATTGGGCAC
AAGGGCCATC CCGAGGTGGA AGGCACCATG GGGCAGGCCA ACGACGGCAT GCTGCTGGTG
GAGTCCGTTG ATGACGTTGC GCATCTCGAG GTGAAAGACC CGACGCGTCT GGCCTACGTG
ACGCAGACCA CGCTGTCGGT GGATGAGACC CAGGAAATCG TGGCGGCCAT CAAGGCACGC
TTTCCGGCGG TGCACGAGCC GAAGAAGCAG GACATCTGCT ACGCGACGCA GAATCGGCAA
GACGCTGTGA AGTTCATGGC ACCGCAAGTG GAAGTGGTGA TCGTAGTCGG CAGCCCGAAC
AGCTCGAACT CGAATCGCCT GCGCGAGTTG GCCGAAAAGC TTGGAGTGCC TGCCTATATG
GTGGATACGC CTGAACAGGT CAAACCTGAA TGGGTAGCCG GCAAGCGTCG CGTGGGCCTG
ACCGCCGGTG CGTCGGCTCC CGAGGAGTTG GCGCAATCGA TCGTCGATCG GCTCAAGGCG
CTGGGCGCCC GCACCGTGCG TCCGCTCGAC GGCATTCAGG AAAACATGTC CTTCCCCCTT
CCGAGGGGGC TTCAAATGAA TTGA
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| Protein sequence | MSNAVNAPLD PIDPVTQADA EVLLAQPRGF CAGVDRAIEI VERALELFGA PIYVRHEIVH
NAYVVGDLRN KGAVFVQELD DVPVGGTVIF SAHGVSRAVR EAAEARGLRV FDATCPLVTK
VHVEVSKMRA QGFEIIMIGH KGHPEVEGTM GQANDGMLLV ESVDDVAHLE VKDPTRLAYV
TQTTLSVDET QEIVAAIKAR FPAVHEPKKQ DICYATQNRQ DAVKFMAPQV EVVIVVGSPN
SSNSNRLREL AEKLGVPAYM VDTPEQVKPE WVAGKRRVGL TAGASAPEEL AQSIVDRLKA
LGARTVRPLD GIQENMSFPL PRGLQMN
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