Gene Rpic12D_2312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2312 
Symbol 
ID8019976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2433870 
End bp2434919 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content67% 
IMG OID644831095 
ProductCDP-6-deoxy-delta-3,4-glucoseen reductase 
Protein accessionYP_002982258 
Protein GI241663898 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.535707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000181189 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTATC AGATCAACGT GCTGCCCAGC GGCCGCCAGT TCCAGGCCGA AGACGGCGAG 
ACCATCCTTG CAGCGGCGCT GCGCCAGGGC ATCGGCCTGC CGTACGGCTG CAAGAACGGC
GCGTGCGGCT CGTGCAAGGG CCATGTGCGC GAAGGCTCTG TCGTACAGGG CAACCACTCG
CCCAACGCGC TGACCGCCCA GGAGGCCACC GAAGGCCGCG CGCTGTTCTG CTGTGCCACG
CCGGCCACCG ACGTCACCAT CGAAGTGCGC GAAGTGCACG GCGCCGGCGA TGTCCCCATC
AAGAAGATCC CGTGCCGCGT CGCGTCGCTG GAAAAGGCCG CGCCGGACGT CACTATCGTC
AAGCTGCAAC TGCCTGCCAC CGAGCGTATG CAATTTCTGG CCGGGCAGTA CGTGGAATTC
CTCCTGCGCG ACGGCAAGCG CCGCAGCTAC TCGATCGCCA ACCCGCCCCA CGACGACGGC
CCGATCGAGC TGCACATCCG CCACATGCCG GGCGGCGCCT TTACCGACTA CGTCTTCGGC
GCCAAGGAAG GCGCCCCGGC CATGAAAGAG CGCGACATCC TGCGCTTCGA AGGCCCGCTG
GGCAGCTTCT TCCTACGTGA AGAATCCGAC AAGCCGATCA TCCTGCTGGC CTCGGGCACT
GGCTTCGCGC CCATCAAGGC GATCATCGAG CATGCCCAGT TCATCGGCAG CACGCGCCCC
ATGACGCTGT ACTGGGGCGG GCGCCGCCCG CAAGACCTGT ACATGCACGC CAAGGCCGAA
GAATGGGCGC GCACGCTGCC GAACTTCACC TACGTGCCGG TCGTCTCCAA CGCCCTACCC
GAAGACGCCT GGACGGGCCG CACCGGCTTC GTCCACCAAG CGGTGATGGC CGACCACCCC
GATCTGTCGG GCCACGAGGT CTACGCCTGC GGCGCGCCGG TGGTGATCAA CTCGGCGCGT
ACGGACTTCG CCGCCCAATG CGGAATGCAT CCGGACGCGT TCTTCGCCGA TTCCTTCACC
TCAGAGGCCG ACCTACACCC GGCCGGCTGA
 
Protein sequence
MAYQINVLPS GRQFQAEDGE TILAAALRQG IGLPYGCKNG ACGSCKGHVR EGSVVQGNHS 
PNALTAQEAT EGRALFCCAT PATDVTIEVR EVHGAGDVPI KKIPCRVASL EKAAPDVTIV
KLQLPATERM QFLAGQYVEF LLRDGKRRSY SIANPPHDDG PIELHIRHMP GGAFTDYVFG
AKEGAPAMKE RDILRFEGPL GSFFLREESD KPIILLASGT GFAPIKAIIE HAQFIGSTRP
MTLYWGGRRP QDLYMHAKAE EWARTLPNFT YVPVVSNALP EDAWTGRTGF VHQAVMADHP
DLSGHEVYAC GAPVVINSAR TDFAAQCGMH PDAFFADSFT SEADLHPAG