| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2305 |
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| Symbol | |
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| ID | 8019969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2424551 |
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| End bp | 2426410 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644831088 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_002982251 |
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| Protein GI | 241663891 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.270143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000364232 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCGCAT ACCGTTCCAA AACCTCCACC GCCGGCCGCA ACATGGCGGG GGCACGCTCG
CTCTGGCGCG CCACCGGCAT GAAAGACGAA GACTTCCAGA AGCCCATCAT CGCGGTGGTC
AATTCGTTCA CCCAGTTTGT TCCCGGCCAC GTGCACCTGA AAGACCTGGG GCAGCTCGTC
GCGCGTGAAA TCGAAGCCGC GGGCGGGGTT GCCAAGGAAT TCAACACAAT CGCCGTGGAC
GACGGCATCG CCATGGGCCA CGACGGCATG CTGTATTCGC TGCCCAGCCG CGACATCATT
GCCGACTCGG TTGAATACAT GGTCAACGCG CACTGCGCCG ATGCCATGGT CTGCATCTCC
AACTGCGACA AGATCACCCC GGGCATGCTG ATGGCCGCCA TGCGCCTGAA CATTCCGGTG
ATCTTCGTCT CGGGCGGCCC GATGGAGGCG GGCAAGACGC GCCTCGCCAA CCCCGTCACC
AAAGCCATCG AAATCAAGAA GCTGGATCTG ATCGACGCGA TGGTGATCGC GGCCGACAGC
AAGTATTCCG ACGAGGAAGT GGCGGAAGTC GAGCGCTCGG CGTGCCCGAC CTGCGGTTCG
TGCTCGGGCA TGTTCACGGC CAACTCGATG AACTGCCTGA CCGAAGCGCT AGGCCTGTCG
CTGCCGGGCA ACGGCACCGT GGTCGCCACG CACGCAGACC GCGAGCAGCT CTTCAAGCGC
GCCGGCCGCC GCATCGTTGA ACTCGCCCGC CAATACTACG AGCAGGAAGA CGAGCGCGTG
CTGCCGCGCT CGGTCGGCTT CAAGGCATTT GAGAACGCCA TGACGCTCGA CATCGCGATG
GGCGGCTCGA CCAACACGAT CCTGCACCTG CTGGCCATCG CTCAGGAAGC GGAGATCGAC
TTCACGATGG CGGACATCGA CCGCCTTTCG CGCGTCGTGC CGCAGCTGTG CAAGGTCGCG
CCGAACACGA ACAAGTACCA CATCGAAGAC GTGCACCGCG CCGGCGGCAT CATGGCCATC
CTGGGTGAGC TGGACCGCGC CGGCAAGCTG CACACCGACG CACCCACCGT GCACGCGCCC
ACGTTGAAGG ACGCGCTGGA CCAGTGGGAC ATCGTCCGCA CGTCGGATGA AGCCGTGCAG
ACCTTCTACC GTGCCGGCCC GGCGGGTATC CCGACGCAGG TCGCGTTCAG CCAGAACACG
CGCTGGCCGA GCCTGGACCT GGACCGCGCC GAGGGCTGCA TCCGCTCGAA CGAGCATGCG
TTCTCGAAGG AAGGCGGCCT GGCCGTGCTG AGGGGCAACA TCGCGCTGGA CGGCTGCGTG
GTGAAGACCG CCGGCGTGGA TGAAAGCATC CTCGTGTTCG AAGGCACGGC CCACGTGACG
GAATCGCAGG ACGAAGCGGT CGCGAACATC CTGGCCGACA AGGTCAAAGC CGGCGACGTG
GTGGTCGTGC GCTACGAAGG CCCGAAGGGC GGCCCCGGCA TGCAGGAAAT GCTGTACCCG
ACCAGCTACA TCAAATCTAA GGGCCTGGGC AAAGCCTGTG CGCTGCTGAC GGACGGCCGC
TTCTCGGGTG GTACGTCGGG GCTGTCGATC GGTCACTGCT CGCCGGAAGC GGCTGCGGGC
GGCGCGATCG GCCTGGTGCG CAACGGCGAC AAGATCCGCA TCGACATCCC CAACCGCACG
ATCAACGTGC TGGTGTCGGA CGAAGAACTC GCACGACGCC GCGAAGAGCA GAACGCCAAG
GGCTGGAAGC CCGCGCAGCC GCGTCCGCGC AAGGTATCGG CCGCACTCAA GGCGTACGCC
AAGTTGGTCA TGTCGGCGGA CAAGGGCGCG GTGCGCGACC TGTCGCAACT GGACGACTGA
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| Protein sequence | MPAYRSKTST AGRNMAGARS LWRATGMKDE DFQKPIIAVV NSFTQFVPGH VHLKDLGQLV
AREIEAAGGV AKEFNTIAVD DGIAMGHDGM LYSLPSRDII ADSVEYMVNA HCADAMVCIS
NCDKITPGML MAAMRLNIPV IFVSGGPMEA GKTRLANPVT KAIEIKKLDL IDAMVIAADS
KYSDEEVAEV ERSACPTCGS CSGMFTANSM NCLTEALGLS LPGNGTVVAT HADREQLFKR
AGRRIVELAR QYYEQEDERV LPRSVGFKAF ENAMTLDIAM GGSTNTILHL LAIAQEAEID
FTMADIDRLS RVVPQLCKVA PNTNKYHIED VHRAGGIMAI LGELDRAGKL HTDAPTVHAP
TLKDALDQWD IVRTSDEAVQ TFYRAGPAGI PTQVAFSQNT RWPSLDLDRA EGCIRSNEHA
FSKEGGLAVL RGNIALDGCV VKTAGVDESI LVFEGTAHVT ESQDEAVANI LADKVKAGDV
VVVRYEGPKG GPGMQEMLYP TSYIKSKGLG KACALLTDGR FSGGTSGLSI GHCSPEAAAG
GAIGLVRNGD KIRIDIPNRT INVLVSDEEL ARRREEQNAK GWKPAQPRPR KVSAALKAYA
KLVMSADKGA VRDLSQLDD
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