Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2288 |
Symbol | |
ID | 8019952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2416399 |
End bp | 2417232 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644831071 |
Product | pentapeptide repeat protein |
Protein accession | YP_002982234 |
Protein GI | 241663874 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00748476 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000682389 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGAAGTTCG AGATCAAAAA CCGCTTCACC GGTGCCGTGC TGTTCGAGTG CGACGCTGAA TCGCTGATGA AGGCAGTGGA GCAAGCCGTC AAGGGCGGCG CGTACCTGAG CGGCGCGGAC CTGAGCGGCG CGGACCTGAG CGGCGCGGAC CTGAGCGGCG CGTACCTGAG CGGCGCGTAC CTGAGCGACG CGTACCTGCG CGGCGCGTAC CTGAGCGGCG CGTACCTGAG CGGCGCGGAC CTGAGCGGCG CGTACCTGAG CGGCGCGGAC CTGAGCGGCG CGTACCTGAG CGACGCGTAC CTGAGCGGCG CGTACCTGCG CGGCGCGGAC CTGAGCGGCG CGGACCTGAG CGGCGCGGAC CTGAGCGGCG CGTACCTGAG CGGCGCGGAC CTGAGCGGCG CGTACCTGAG CGACGCGTAC CTGCGCGGCG CGTACCTGAG CGACGCGTAC CTGAGCGACG CGGACCTGAG CGGCGCGGAC CTGAGCGGCG CGTACCTGAG CGGCGCGGAC CTGAGCGACG CGCCCGTCAT TGAAAACATC CACCAGAAGG TATATGCCGC CGCGTCGCAG CCCGATGCGC TGGATATGGG CGTCTGGCAC AACTTGTGTG GCACGGCGCA CTGCCGCGCC GGCTGGGTGG TGACGATCGC AGGTGAAGCC GGCAAGGAAC TCGAATCGAA GATCGGCACC GCCGGCGCAG CACTGGCGAT CTACCTCAAA TCTGACCCGG AGCGCTTCAA GACTGAGCCC ATTCCGAACT TCTACTGCGA CAACGACGCG GCGCTCGCGG ATATGAAGCG CATGGCTGAG GAAGAAGCTG CGCGAGCCGC CTAA
|
Protein sequence | MKFEIKNRFT GAVLFECDAE SLMKAVEQAV KGGAYLSGAD LSGADLSGAD LSGAYLSGAY LSDAYLRGAY LSGAYLSGAD LSGAYLSGAD LSGAYLSDAY LSGAYLRGAD LSGADLSGAD LSGAYLSGAD LSGAYLSDAY LRGAYLSDAY LSDADLSGAD LSGAYLSGAD LSDAPVIENI HQKVYAAASQ PDALDMGVWH NLCGTAHCRA GWVVTIAGEA GKELESKIGT AGAALAIYLK SDPERFKTEP IPNFYCDNDA ALADMKRMAE EEAARAA
|
| |