Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2267 |
Symbol | |
ID | 8019931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2405212 |
End bp | 2405868 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644831050 |
Product | phage protein |
Protein accession | YP_002982213 |
Protein GI | 241663853 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000190107 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCGCAAG AAAAGAAGAG CGCGCCAGAC TGGGAACGTA TCGAAGCGGA CTACCGCGCC GGCGTCCTGT CGGTGCGTGA GATTGCTGCC TCGCAGGGGG TGAGCCATAC GGCCATCAAC AAGCGGGCAA AGGCGGAAGG CTGGTCCCGT GACCTGTCCG CAAAGATCAA GGCGAAAGCC GAAACGCTGG TTTCCAAGCG CGAGGTTTCC ACCAAGGTTT CCACAGATGT GGCAACTGAG CGCCTGATCG TTGAGGCCAA TGCCGAGGTG ATTGCGGGCA TCCGCTTGGC GCACCGCAGC GACATAGCCC GCGCGCGCCG CGTGGCGATT GACCTGCTGT CCGAGCTGGA GATTGAAACA GGCAACCTGG ACTTGTTCGA GGAACTGGGC GAAATCCTGC GCTCTGAGGA CGACAAGGGC CAAGACAAGC GTAACGACGT CTACCGCAAG GTTCTCTCCA GCGCTGGCCG GGTGGACAGC ATGAAGAAGC TGGCCGACAC GCTCAAGGTG CTGATCGGGC TGGAGCGCGA GGCGTACGGC CTGCAGGATG TTGCGCCACC GCCTGCCGCG CCGCCAGTGC AGAACATCAA CGAAACGACG GTCGTGATTC AGAATGCAGT CGCCGACGCC GTCGCCCAGC TCGAATCCCA GTATTGA
|
Protein sequence | MAQEKKSAPD WERIEADYRA GVLSVREIAA SQGVSHTAIN KRAKAEGWSR DLSAKIKAKA ETLVSKREVS TKVSTDVATE RLIVEANAEV IAGIRLAHRS DIARARRVAI DLLSELEIET GNLDLFEELG EILRSEDDKG QDKRNDVYRK VLSSAGRVDS MKKLADTLKV LIGLEREAYG LQDVAPPPAA PPVQNINETT VVIQNAVADA VAQLESQY
|
| |