Gene Rpic12D_2244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2244 
Symbol 
ID8019908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2386978 
End bp2387637 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content59% 
IMG OID644831027 
Productputative bacteriophage protein 
Protein accessionYP_002982190 
Protein GI241663830 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.666792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.433494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGG CTTCTGACTA CACAGCCCTC ATCACCACCG AGCACGCTGG CAAGCCAAAG 
TTCATGACGA TGATGTCCAT CGTCGCGCAG TGCTTTGCGG ATCAGATCAA CTTGGCGCAG
TCGATCCCTG CGGCGTTCGA TCTGGACCAG GCGATCGGTG TGCAGCTGGA CGCGGTGGGG
CTGTGGGCTG GCATCAAGCG CCAGGTGAAG AGACCTCTGA GCGTCTATTT CTCCCTCGAT
ACGGCTGGCC TAGGTTTTGA TCAAGGCAAC TGGCAGGGTC CGTTCAACCC AAGCACGGGA
CTCACGTCTC TGGATGACGC GACGTTCCGT ACGCTGATCC GCGCCAAGAT CGCTGCGAAC
AGCTGGGACG GGACGATTCC AGGGGCGGCC GCTGCATACG CCAACCTGTT CAATGGTTCT
GGAAGCTACA TCTTCATCCA GGACAACCAG GACATGACGA TGACGGTGGG CGTCTCTGGC
GCTATCCCAA GCGCGCTGCT GCGCGCGCTG TTCTCGGGTG GCTATCTGCC ACTCAAGCCA
GAAGGCGTGC ATGCCAACTA CTTTGTTCCG TCCGGCAATA ACACGCCGCT GTTCGGGTTC
GATGTGCAGA ACCAGTACAT CGGGGGATTC GACTCAGGGT CTTGGGCCGT ATCGGCATAA
 
Protein sequence
MAQASDYTAL ITTEHAGKPK FMTMMSIVAQ CFADQINLAQ SIPAAFDLDQ AIGVQLDAVG 
LWAGIKRQVK RPLSVYFSLD TAGLGFDQGN WQGPFNPSTG LTSLDDATFR TLIRAKIAAN
SWDGTIPGAA AAYANLFNGS GSYIFIQDNQ DMTMTVGVSG AIPSALLRAL FSGGYLPLKP
EGVHANYFVP SGNNTPLFGF DVQNQYIGGF DSGSWAVSA