Gene Rpic12D_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2233 
Symbol 
ID8019896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2378534 
End bp2379418 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content67% 
IMG OID644831015 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_002982179 
Protein GI241663819 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCA TTGCCTTCAT CGGCCTCGGC AACATGGGCA CGCCGATGGT CCAACACCTG 
ATTGCCGCGG GACATACGGT GCGCGCCTAT GTGCGCCGTC CGGAAGCCGC CGACAACGCC
CGCACCCTCG GCGCCGAGCC CTGCAACACC CCCGCTGAAG CGGCGCGCGA CGCGGAGGTC
ATCTTCACCA ACGTCACGTC CACGGCCGAT GTGGAAAGCG TGCTGCTGGG GCCGGATGGT
GTCATCCATG GCGCGCCGCG TGGTGCCGTG TGCATCGATC ACAGCACGAT CTCCGCCGTG
GCCACGCGCC GGATCGCGGC CGATTTGGAA GCGGCGGGAC TGGAGTTCCT GGATGCGCCG
GTCTCAGGCG GCACCGCAGG CGCGCAGAAG GCCACGCTGT CGATCATGGT CGGCGGCAAG
GCCGAAGTGC TGGAGCGCGT GCGCCCGCTG CTGCAGCTGC TGGGCACCAC GATCACGCAC
GTCGGCGGCC ACGGTGCCGG CCAAGTCGCC AAGGCGTGCA ACCAGATCGT GCAGGTCATC
AATATCCAGG GCATTGCCGA AGCCATGCTG TTTGCGCGCG CCCAGGGGAC CGACCCGTCG
CGTGTGCTGG CTGCCATCGG CCCGGGCTTT GCGGGCAGCC GCATGCTCGA CCTGGAAGGG
CCCAAGATGG CCGAGCGCAA CTTTGCCGCC GGCATCGAAG CGCGCCTGCA CGACAAGGAT
TTCGGTCTGG TGCGCGAGAT CGCCCAGGAA CTCGGCCTGC AGATGCCGGC GATGGAGCTG
GTAGCTTCGC AGCTCAATAC GCTGGTCGCC AACGGCTGGG GGTATGACGA TACGGCGTCG
CTGCTGCGCG TGCTCGAGCA GCAGAACAAG CAGCAGACCG ATTGA
 
Protein sequence
MTRIAFIGLG NMGTPMVQHL IAAGHTVRAY VRRPEAADNA RTLGAEPCNT PAEAARDAEV 
IFTNVTSTAD VESVLLGPDG VIHGAPRGAV CIDHSTISAV ATRRIAADLE AAGLEFLDAP
VSGGTAGAQK ATLSIMVGGK AEVLERVRPL LQLLGTTITH VGGHGAGQVA KACNQIVQVI
NIQGIAEAML FARAQGTDPS RVLAAIGPGF AGSRMLDLEG PKMAERNFAA GIEARLHDKD
FGLVREIAQE LGLQMPAMEL VASQLNTLVA NGWGYDDTAS LLRVLEQQNK QQTD