Gene Rpic12D_2229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2229 
Symbol 
ID8019892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2373646 
End bp2375307 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content64% 
IMG OID644831011 
ProductSulfite reductase (ferredoxin) 
Protein accessionYP_002982175 
Protein GI241663815 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0155] Sulfite reductase, beta subunit (hemoprotein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCAAT ACGACGCTTA CGATCACCGC CTCGTCGCCG ACCGCGTTGC GCAGTTCCGC 
GACCAGGTGC GCCGCCGTAT CGCTGGCGAA CTGACCGAAG AAGAGTTCCT GCCGCTGCGC
CTGCAGAATG GTCTGTACTA CCAGCGCCAC GCCTATATGC TGCGTGTGGC GATTCCGTAC
GGCCACCTGC GCGCCAAGCA ACTGCGCATG CTCAGCCACA TCGCCGCCGA GCACGACCGC
GGCTACGGCC ACTTCAGCAC GCGCCAGAAC ATCCAGTACA ACTGGATCGA GCTGGAGCAG
GTGCCCGACA TCCTGGCCAA GCTGGCCTCG GTGGAAATGC ACGCCATCCA GACCTCGGGC
AACTGCATCC GCAACATCAC GACCGACCAG TTTGCCGGCG TGGCACCGGA CGAGGTGATC
GATGCGCGCC CGCTGGCGGA AATCCTGCGC CAATGGTCGA CGTTCATCCC GGAGTTCGCG
TTCCTGCCGC GCAAGTTCAA GATTGCGGTG TCGGCCTCGC GAGACGACCG CGCCGTGACG
CAACTGCATG ACATCGGCGT CTACGCCTAT GAGAAGGACG GGCAGACGCT GCTGCGCATC
CTGGCCGGCG GCGGCATGGG CCGCACGCCG ATCCTGGGCG CGATCATCAA GGAAGACCTG
CCGTGGCAGC ACATGCTGTC GTACATCGAG GCCGCCGTGC GCGTGTACAA CCGCTACGGC
CGTCGCGACA ACAAGTACAA GGCGCGTATC AAGATTCTCG TGAAGGCCAT CGGCGCTGAG
GAATTTGCGC GCCAGGTGGA AGAAGAGTGG CAGCACATCA AGGACGGCCC GTCGACCATC
ACGCAGGCCG AGTTCGACCG CGTGGCGCAG TTCTTCGCGC CGCCCGCGTA TGAAAAGCTG
GCCGATACCG ATGCCGGCTA TGAAAAGGCG CTGCTGGAGA ACAAGGCGTT CGCACGCTGG
GTCAGCCGCA ACGTGCATCC GCACCGCGTG CCGGGCTACG CCGCGGTTAC GCTGTCGCTC
AAGCCGGGCG CGGCGCTGCC GCCGGGCGAT GCCACGGCCG AGCAGATGGC GCTGGTGGCG
GATTGGTCGG AGCGCTTCGG CTTTGGCGAG GTGCGTGTCG CGCACGAGCA GAACCTGATC
CTGCCGGACG TGAAGAAGCA CGACCTGCTG GAGCTGTGGC AGCTGGCAAA GGAGCACGGC
ATGGCCACCG CCAACATCGG CCTGCTGACC GACATCATTG CCTGCCCGGG CGGTGACTTC
TGCTCGCTGG CCAACGCCAA GTCGATTCCC ATCGCGCAGG CGATCCAGGC GCGCTTCGAC
GATCTCGATT ACGTGCACGA CCTGGGCGAG CTGTCGCTCA ACATCTCGGG TTGCATCAAC
TCGTGCGGTC ACCACCACGT CGGCAACATC GGCATCCTGG GTGTCGATAA GCACGAAGAA
GAGTGGTACC AGGTGTCGCT GGGCGGCGCA CAGGGCAACG ACTCGGCGAT CGGCAAGATC
ATCGGCCCGT CGTTCAAGGC CGAAGAAATG CCCGACGTGA TCGAGCGCAT CATCGACACC
TTTGTTGCGA ACCGCACGGA AGACGAGCTG TTCATCGACA CCTATCACCG CATCGGCATG
ACCCCGTTCA AGGAACGCGT CTACGCCCGT GCAGAAGCCT GA
 
Protein sequence
MYQYDAYDHR LVADRVAQFR DQVRRRIAGE LTEEEFLPLR LQNGLYYQRH AYMLRVAIPY 
GHLRAKQLRM LSHIAAEHDR GYGHFSTRQN IQYNWIELEQ VPDILAKLAS VEMHAIQTSG
NCIRNITTDQ FAGVAPDEVI DARPLAEILR QWSTFIPEFA FLPRKFKIAV SASRDDRAVT
QLHDIGVYAY EKDGQTLLRI LAGGGMGRTP ILGAIIKEDL PWQHMLSYIE AAVRVYNRYG
RRDNKYKARI KILVKAIGAE EFARQVEEEW QHIKDGPSTI TQAEFDRVAQ FFAPPAYEKL
ADTDAGYEKA LLENKAFARW VSRNVHPHRV PGYAAVTLSL KPGAALPPGD ATAEQMALVA
DWSERFGFGE VRVAHEQNLI LPDVKKHDLL ELWQLAKEHG MATANIGLLT DIIACPGGDF
CSLANAKSIP IAQAIQARFD DLDYVHDLGE LSLNISGCIN SCGHHHVGNI GILGVDKHEE
EWYQVSLGGA QGNDSAIGKI IGPSFKAEEM PDVIERIIDT FVANRTEDEL FIDTYHRIGM
TPFKERVYAR AEA