Gene Rpic12D_2227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2227 
Symbol 
ID8019890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2372271 
End bp2373086 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content66% 
IMG OID644831009 
Productphosphoadenosine phosphosulfate reductase 
Protein accessionYP_002982173 
Protein GI241663813 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin)
[TIGR02055] thioredoxin-dependent adenylylsulfate APS reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACG TGCAAGACGT GAGCGTGTCC GAAGTGCCGG TGTCCGCAAT CGGTCGCCCG 
GTGCTTTGGA CGCGTCCGGC GTACACCGGC ACGGCCGAAG CCCTGGCGGC GAAGGAAGCC
GCGCTGTTCG AGCGCCTGGC CGAGATCGCC GCCAAGCACG GCGTAGCGAA GTTCGCCACC
AGCCTGGCTG CAGAAGACAT GGTCGTGACC GATGCGATCC TGCGCAGCCC CGAGGCCGTG
CGCGCGCACC TGCCGATCTT TACGTTGCAG ACGGGCCGTC TGCACGCCGA AACGCTGGAG
ATGCTCGATC GCGTTCGGGC GCATTGCGGT TACGCCATCG AGCAGTACGC GCCGGACGCT
CGCGCGGTGG AAGCCTACGT GCGCGACCAC GGGCTCAACG CTTTTTACGA CAGCATCGAA
CTGCGCAAGG CGTGCTGCAA CATCCGCAAG GTGGTGCCGC TGAATCGCGC GTTGAAAGAC
GCGGACGCGT GGCTCACGGG CCAGCGCCGC GAACAGGCCG TCACGCGTGC CGACCTGCCG
TTTGCCGAAG ACGACGAGGC CCGCGGCATC GCCAAGTACA ACCCGCTGTT CGACTGGTCC
GAGGCCGAAG TCTGGGCGTA CCTCGAGCAG CACAACGTGC CCACCAACGC GCTGCACGAC
AAGGGCTATC CCAGCATTGG CTGCGAGCCT TGTACGCGTG CGGTGCGCGC TGGTGAGGAT
GTGCGCGCTG GCCGCTGGTG GTGGGAATCG CGCGACAGCA AGGAATGCGG TCTGCATGTG
ACAAATTCGG CGACGAATCT GTCGCAAAAG AGCTAA
 
Protein sequence
MSDVQDVSVS EVPVSAIGRP VLWTRPAYTG TAEALAAKEA ALFERLAEIA AKHGVAKFAT 
SLAAEDMVVT DAILRSPEAV RAHLPIFTLQ TGRLHAETLE MLDRVRAHCG YAIEQYAPDA
RAVEAYVRDH GLNAFYDSIE LRKACCNIRK VVPLNRALKD ADAWLTGQRR EQAVTRADLP
FAEDDEARGI AKYNPLFDWS EAEVWAYLEQ HNVPTNALHD KGYPSIGCEP CTRAVRAGED
VRAGRWWWES RDSKECGLHV TNSATNLSQK S