Gene Rpic12D_2222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2222 
Symbol 
ID8019885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2368215 
End bp2368586 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content69% 
IMG OID644831004 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_002982168 
Protein GI241663808 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.910475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.784079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCC GCGCACTTGT CCTGTTTGCG CACGGCGCGC GCGACGCGCG CTGGCGTGAA 
CCGTTCGACC GCCTGCGCGA GCGTTTGGCT GCGCAGCAGC CCGACATTGA CACGCGCCTC
GCCTTTCTCG AACTGATGGC GCCCGATCTG CCGGGCACCA TCGCTGACCT GGCCGCAAAC
GGCACGCAGA GCATCACCAT CGTGCCCGTG TTCTTCGGCC AGGGCGGCCA CCTGCGGCGC
GATCTGCCTG CGCTGGTCGC GCAATGCACG CAGGCGCATC CCGCCCTCTC CATCCGCTGC
GCCGACGCCG TTGGCGAAGA CGACGCCGTA CTCGACGCCA TCGCGGGTTA CTGCGTCCGG
CAACTGGGCT AA
 
Protein sequence
MAARALVLFA HGARDARWRE PFDRLRERLA AQQPDIDTRL AFLELMAPDL PGTIADLAAN 
GTQSITIVPV FFGQGGHLRR DLPALVAQCT QAHPALSIRC ADAVGEDDAV LDAIAGYCVR
QLG