Gene Rpic12D_2214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2214 
Symbol 
ID8019877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2359688 
End bp2360590 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content64% 
IMG OID644830996 
Productprolipoprotein diacylglyceryl transferase 
Protein accessionYP_002982160 
Protein GI241663800 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0682] Prolipoprotein diacylglyceryltransferase 
TIGRFAM ID[TIGR00544] prolipoprotein diacylglyceryl transferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.913014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATCC ATCCGCAATT CGATCCCGTC GCCCTGCATC TGGGGCCGCT CGCCATCCGC 
TGGTACGGCC TGATGTATCT GGCGGCGTTC ATCATGTTCC TGTGGTTCGG CCGACTGCGC
ACGCGCCAGC CGCACATCGC CGCCGAAGGC TGGACCGGCC GGGACCTTGA CGACATGCTT
TTCTACGGCG TGCTCGGCGT GATTCTCGGC GGGCGCCTTG GCTACGTGCT GTTCTACAAG
CCGGATTGGT ATTTCGCCCA CCCGCTCGAC ATCTTCAAGG TCTGGGAGGG CGGCATGGCC
TTCCACGGCG GCTTCCTCGG TGTGGTCGTG GCGATGATGC TGTATGCCCG CATGCGCGGC
CGCTCGTGGA TGCAAGTGAC CGATTTCATC GCGCCGATGG TGCCGTGCGG CCTCGCAGCA
GGGCGCCTCG GCAACTTCAT CAACGGCGAG CTATGGGGCC GCGTGTCGTC GCCCAACCTG
CCGTGGGCGA TGATGTTCCC GCAAGCGCAG GGCGAAGACC GTGAGTGGCT GCTTTCGCAT
GCGCAAGAGG CCGTCACCAG CGGCCTGCAG GCCGTTTTTG ACCAGTACCA CATGCTGCCG
CGCCACCCCT CGCAGATCTA CCAGTTCCTC GGCGAGGGCC TGCTGTTCTT CATCCTGCTG
TGGCTGTATG CGCGCAAGCC GCGGCCGATG GGTGCGGTGT CGGGCGCATT CCTGCTCGGC
TACGGCGTGT TCCGCTTCGC CGCAGAATTC GCGCGTGAGC CAGACAACTT CCTCGGCCTG
CTCGCGGCGA ATCTTTCAAT GGGGCAGTGG CTGTCGTTGC CGATGATCCT GATCGGCATC
GCCATGCTGG TCTGGTCCTA TCGTCGTGCA GGCAACGGTG CAAAAAGCCA GGCACACGCC
TGA
 
Protein sequence
MLIHPQFDPV ALHLGPLAIR WYGLMYLAAF IMFLWFGRLR TRQPHIAAEG WTGRDLDDML 
FYGVLGVILG GRLGYVLFYK PDWYFAHPLD IFKVWEGGMA FHGGFLGVVV AMMLYARMRG
RSWMQVTDFI APMVPCGLAA GRLGNFINGE LWGRVSSPNL PWAMMFPQAQ GEDREWLLSH
AQEAVTSGLQ AVFDQYHMLP RHPSQIYQFL GEGLLFFILL WLYARKPRPM GAVSGAFLLG
YGVFRFAAEF AREPDNFLGL LAANLSMGQW LSLPMILIGI AMLVWSYRRA GNGAKSQAHA