| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2209 |
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| Symbol | |
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| ID | 8019871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2354689 |
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| End bp | 2356563 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830991 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002982155 |
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| Protein GI | 241663795 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.400233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGC TTGCGGGCGC ACTCACGGGG GTCATGGCGG GTGCAGTTGC GCCGGCCTGG
GCACAAAGCA ACACACAGGT CGCCAGCACG CCCGTCGGCG AGCTGAATCC GACGGTGGTG
ACGGCCTCGC GCAGCGAGCA GCCTCTGTCG GATGCGCTGC CGCACACGAC GGTCATTAGC
CGCGCTGACA TCGAGCGCTC GCAGGCACCG GATGCGGTGA CGCTGCTGCG CCGCGAGGCC
GGCATCGAAA TCGCGCAGAA CGGCGGCCCT GGCACCAACG CCAGCCTGTT CATGCGCGGC
GCCGGCTCCA ATCAGACGCT GGTTCTGATT GACGGTGTGC GCGTGGCGTC CGGCACCTCG
GGTGGTGCGC AGATCGCGCA ATTGATGTCC GATCAGATCG ATCACATCGA GGTGGTGCGT
GGCAACGTGT CTGCGCTGTA CGGCTCCGAC GCGATTGGCG GCGTGGTGCA GATCTTCACG
CGCAACGGTC GCGGCCATGG CCCGCTCGCC AATGCCGAGA TCGAATACGG CGCCCGCAAT
ACCAAGCGCG CGCAGGCTGG CATCAGCGGG TCGGTGGGCG AGAACGGTGA TACGTCGTTT
GCGCTGTCGG TGTCGGAATT CAGGACCAAC GGGTTTTCGA CCATCAACCC GCTGCAGGCG
CCCAAGGCCA ACCCGAACGA CAATCCCTAC ACGAACAAGA GCGTGTCGGC GCAGTTGTCG
CATCGTTTCC CCGCAGATTG GCAAGCGGGC CTGACGTACT TCCAGACCTG GGGCGACGTC
AGCTACGACA ACGCTTTCGG CAAGCCCACC GACAACAATG TTGCACACAA CGTGGTGCGC
TCGATGTCGG CCTATGTGGA CGGCAAGGTC ACGCAGGACT GGAAGACGCG CGTAACGCTG
TCGCAAGGCG ACGACCGAAG CTTGAATTTC ACGAATGGCG TGTTGCAGGT GCCGGCGCGC
TTCAATACCC GCAACCAAAC AGCGAGCTGG CAGAACGACT GGGCTTTCAT GCCGAATCAG
CTGCTCAAGG TGGGACTGGA GCATCTGCAG ACCAGCATCG ACAGCGATGC CTACAACGTG
CCCACGCGCA ATGTCGATTC CGGCTACATC GGTTACGAAG GAAAGTTCGG TCCGCACCAA
TTGCAGTTGA ACCTGCGTCG TGACCGCTAC TCGGACTTTG GTGGCGCGAA CAGCTACTAC
GCCGGTTACG GCTTCGCATT CAATCCGCAA TGGAAGGCGG TGGCGAGCGT GAGCAATGCT
TTCCGCGCGC CCAGCTTCAA CGAGCTGTAC TACCCGTTCT TCGGCAACCC GAATGTACAG
CCTGAGAAGG CGCGTTCAGT GGAAGGCGGC GTCGAATACA GCAGCGCGAT GGGCCTGGTG
CGCGTGACAG CGTTCGAGAC CGACTACAGC AACCTGATCA CCAGCGTGTT CGATCCGGTG
GCGGGCACCT TCACGGCGGC CAACGTCAAC CGCGCGCGCG TGAACGGGCT GGAGACCTCC
TACCGCGGTT CGATCTATGG CGTGGATCTG CGTGCCAGCT TTACCATGCA GAATCCGCAG
GACTTGTCGG CCAACCAGTT GCTGTCGCGC CGTGCGCGGC ACTTCGGCAG CGTCTCGGCA
TACAAGACGT TCGGGCCGTT CTCGGCGGGT GTGGAGTGGA ATGCGGCGGG AGATCGTCAG
GATTCGACCC AGACGCTCGG CGGCTATGGC CTGCTGAACC TGGTCGGCCG CTACCAGATC
ACGCCTGACT GGGCAGTGTC GGCACGGGTC GAGAACGTGA CGAACAAGAA CTACCAGTTG
ATCTACCCGT ACAACACGGC GTCGCGTGGG GTGTTCTTCA CGCTGTCGTG GCAACAGCAC
AAACCGAAGC GATGA
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| Protein sequence | MRALAGALTG VMAGAVAPAW AQSNTQVAST PVGELNPTVV TASRSEQPLS DALPHTTVIS
RADIERSQAP DAVTLLRREA GIEIAQNGGP GTNASLFMRG AGSNQTLVLI DGVRVASGTS
GGAQIAQLMS DQIDHIEVVR GNVSALYGSD AIGGVVQIFT RNGRGHGPLA NAEIEYGARN
TKRAQAGISG SVGENGDTSF ALSVSEFRTN GFSTINPLQA PKANPNDNPY TNKSVSAQLS
HRFPADWQAG LTYFQTWGDV SYDNAFGKPT DNNVAHNVVR SMSAYVDGKV TQDWKTRVTL
SQGDDRSLNF TNGVLQVPAR FNTRNQTASW QNDWAFMPNQ LLKVGLEHLQ TSIDSDAYNV
PTRNVDSGYI GYEGKFGPHQ LQLNLRRDRY SDFGGANSYY AGYGFAFNPQ WKAVASVSNA
FRAPSFNELY YPFFGNPNVQ PEKARSVEGG VEYSSAMGLV RVTAFETDYS NLITSVFDPV
AGTFTAANVN RARVNGLETS YRGSIYGVDL RASFTMQNPQ DLSANQLLSR RARHFGSVSA
YKTFGPFSAG VEWNAAGDRQ DSTQTLGGYG LLNLVGRYQI TPDWAVSARV ENVTNKNYQL
IYPYNTASRG VFFTLSWQQH KPKR
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