Gene Rpic12D_2207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2207 
Symbol 
ID8019869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2352837 
End bp2353676 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content68% 
IMG OID644830989 
ProductABC transporter related 
Protein accessionYP_002982153 
Protein GI241663793 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.215656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGC GGCGCCGCCC AAGTCCTGCC CCGGATGCAT TCGCGCAATT GGACGCGGCG 
CCCGAACTGG TGCTGCACGA TCTGCGAGTG GCGGTCGATG GGCGTGTGCT GGTTGAGCGC
TTATCGATGA CGGCCACCGC CGGACAGCTC TGGTGCGTGG TCGGCCCGAA TGGCGCGGGC
AAGTCGACAT GGTTGTCGGT GCTGGCGGGC TTGCGTTCGC CGGACGGCGG CAGCGTCGCG
CTTGACGGTG TGCCGCTTAC CGATTGGCCG CCGCTCGCGA TGGCCCGCCG TCGCGCGTTT
CTGCCGCAGG CCTTGCACGA CACCTTTCCC ATCACCGTGT ACGACGCGGT GATGACCGGC
CGCCACCCGC ATCTCGCGCG CTGGGAATGG GAGGGAGATG CCGATGCGCG CGCTGTGGAT
GCAGCGGTGT CGGCGCTGCA GCTACAGTCG CTGGCAGAAC GCGATGTGCG CACGCTTTCT
GGCGGTGAGC GTCAGCGCGT GGCGATGGCT GCCGTGGTGG CGCAGGAGGC GCGCGTGCTG
CTGCTCGACG AGCCCGTCGC TCACCTCGAT TTGCATCAGC AGGTTGCCGT GCTCCGCCTG
CTGCGCGAAG GCTGCCGCAA ACAGGGCTGG CTGGTCGTGC TGACCGTGCA CGACTTGAAC
CTCGCGCGCC GCTTCGCGAC GCATGCGCTG CTGATGGACG GCGCCGGTCA CACGACCGCC
GGGATCGCAG CCGAGGTGCT GACCCCCGAG CATTGCGCAC GTGTGCTGCG CACGCCTATT
GCCGAGGTGG CCAACGGCCG CCATACGGCC TTGATTCCTG ATGACTCCGA TGACGACTGA
 
Protein sequence
MSWRRRPSPA PDAFAQLDAA PELVLHDLRV AVDGRVLVER LSMTATAGQL WCVVGPNGAG 
KSTWLSVLAG LRSPDGGSVA LDGVPLTDWP PLAMARRRAF LPQALHDTFP ITVYDAVMTG
RHPHLARWEW EGDADARAVD AAVSALQLQS LAERDVRTLS GGERQRVAMA AVVAQEARVL
LLDEPVAHLD LHQQVAVLRL LREGCRKQGW LVVLTVHDLN LARRFATHAL LMDGAGHTTA
GIAAEVLTPE HCARVLRTPI AEVANGRHTA LIPDDSDDD