Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2202 |
Symbol | |
ID | 8019864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2348864 |
End bp | 2349820 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644830984 |
Product | periplasmic binding protein |
Protein accession | YP_002982148 |
Protein GI | 241663788 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.134078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0623252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCAATC GTCTCTCTCG CCTCACCCGT CGCCTGTATG TGTGCGGCCT GTCTGCTATT GCGGTCACGA TCGCTGCCGC ACCGGCATGT GCTGCCATTT CCGTCACAGA CGATAGCGGC GCCACCGTGA CGCTGCAGCG CCCCGCCCAA CGCATCGTCA GCCTCGCTCC ACATGCGACC GAGCTGCTGT TCGCGGCAGG CGGCGGTGGC CGCATCGTCG GCACCGTGGC TTACAGCGAC TACCCGCCAG CCGCACGCGA CATTCCCCAC GTAGGGGATA ACCGCTCGCT CGATCTGGAG CGCATCGCTG CCCTCAAGCC TGATCTGGTT GTGGTCTGGC GCCACGGCAA CGCGCAAAAG CAGATCGACC GCCTGCGTGC GCTCGGCATT CCGCTGTTCT TTTCCGAGCC GCATCGCATG AGCGATATTC CGCGCTCGAT CGAGGCGCTC GGCACACTGC TCGACACCCG CGCGAGCGCG CATGACGCCG CGCAGCAATT CCGCCAACGC GCCGATACGC TGCGCCAACG CTACGCGAGC CGGCCGCCGG TTTCGGTGTT CTATCAGGTA TGGGAACAGC CGCTGATGAC GCTCAACGGC CAGCACATCT TCTCTGACGT GCTGGCGCTG TGCGGCGGCC GTAATGTGTT TGCCGGCGAG CCCTTGCTGG TGCCGACCGT TTCGCCCGAG GCCGTGATCG CAGCCAACCC CGAAGTGCTG CTCACCGCGA GCATGGGCGC CACGCAAGGC AGCCGTCCGA TCGATACGCT TGAGGCGTGG AAACGCTGGC CGCAATTGCT GGCGGTGCAA CGTGGCAATC TCTTCAGCAT CAACGGTGAC CTGATCAACC GCTTTGGCCC GCGCCTGGTG GAAGCCGCAA CGCTGTTGTG CGAAGACCTG GAACAAGCCC GAGCGCGGCG CCTCGGCTCG CAAGCCACCA ACGGGCAGGG GCGCTAA
|
Protein sequence | MPNRLSRLTR RLYVCGLSAI AVTIAAAPAC AAISVTDDSG ATVTLQRPAQ RIVSLAPHAT ELLFAAGGGG RIVGTVAYSD YPPAARDIPH VGDNRSLDLE RIAALKPDLV VVWRHGNAQK QIDRLRALGI PLFFSEPHRM SDIPRSIEAL GTLLDTRASA HDAAQQFRQR ADTLRQRYAS RPPVSVFYQV WEQPLMTLNG QHIFSDVLAL CGGRNVFAGE PLLVPTVSPE AVIAANPEVL LTASMGATQG SRPIDTLEAW KRWPQLLAVQ RGNLFSINGD LINRFGPRLV EAATLLCEDL EQARARRLGS QATNGQGR
|
| |