Gene Rpic12D_2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2202 
Symbol 
ID8019864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2348864 
End bp2349820 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content66% 
IMG OID644830984 
Productperiplasmic binding protein 
Protein accessionYP_002982148 
Protein GI241663788 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.134078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0623252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAATC GTCTCTCTCG CCTCACCCGT CGCCTGTATG TGTGCGGCCT GTCTGCTATT 
GCGGTCACGA TCGCTGCCGC ACCGGCATGT GCTGCCATTT CCGTCACAGA CGATAGCGGC
GCCACCGTGA CGCTGCAGCG CCCCGCCCAA CGCATCGTCA GCCTCGCTCC ACATGCGACC
GAGCTGCTGT TCGCGGCAGG CGGCGGTGGC CGCATCGTCG GCACCGTGGC TTACAGCGAC
TACCCGCCAG CCGCACGCGA CATTCCCCAC GTAGGGGATA ACCGCTCGCT CGATCTGGAG
CGCATCGCTG CCCTCAAGCC TGATCTGGTT GTGGTCTGGC GCCACGGCAA CGCGCAAAAG
CAGATCGACC GCCTGCGTGC GCTCGGCATT CCGCTGTTCT TTTCCGAGCC GCATCGCATG
AGCGATATTC CGCGCTCGAT CGAGGCGCTC GGCACACTGC TCGACACCCG CGCGAGCGCG
CATGACGCCG CGCAGCAATT CCGCCAACGC GCCGATACGC TGCGCCAACG CTACGCGAGC
CGGCCGCCGG TTTCGGTGTT CTATCAGGTA TGGGAACAGC CGCTGATGAC GCTCAACGGC
CAGCACATCT TCTCTGACGT GCTGGCGCTG TGCGGCGGCC GTAATGTGTT TGCCGGCGAG
CCCTTGCTGG TGCCGACCGT TTCGCCCGAG GCCGTGATCG CAGCCAACCC CGAAGTGCTG
CTCACCGCGA GCATGGGCGC CACGCAAGGC AGCCGTCCGA TCGATACGCT TGAGGCGTGG
AAACGCTGGC CGCAATTGCT GGCGGTGCAA CGTGGCAATC TCTTCAGCAT CAACGGTGAC
CTGATCAACC GCTTTGGCCC GCGCCTGGTG GAAGCCGCAA CGCTGTTGTG CGAAGACCTG
GAACAAGCCC GAGCGCGGCG CCTCGGCTCG CAAGCCACCA ACGGGCAGGG GCGCTAA
 
Protein sequence
MPNRLSRLTR RLYVCGLSAI AVTIAAAPAC AAISVTDDSG ATVTLQRPAQ RIVSLAPHAT 
ELLFAAGGGG RIVGTVAYSD YPPAARDIPH VGDNRSLDLE RIAALKPDLV VVWRHGNAQK
QIDRLRALGI PLFFSEPHRM SDIPRSIEAL GTLLDTRASA HDAAQQFRQR ADTLRQRYAS
RPPVSVFYQV WEQPLMTLNG QHIFSDVLAL CGGRNVFAGE PLLVPTVSPE AVIAANPEVL
LTASMGATQG SRPIDTLEAW KRWPQLLAVQ RGNLFSINGD LINRFGPRLV EAATLLCEDL
EQARARRLGS QATNGQGR