| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2193 |
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| Symbol | |
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| ID | 8019855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2339921 |
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| End bp | 2341708 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830975 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_002982139 |
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| Protein GI | 241663779 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.193609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCT CCAATCGACC ATCGCGACCG TTCCGAGCAC CACGCTTCCG TCTTCTGGGT
TTGCCCGGCG CCGCGCTGGC GGCGGGCTTT GCGCTGTCCC TCATCTGCGC CCCGGCGCAC
GCTGAATACG ACGTCAAGAT CGAGGCGCCG AAGTCCATTC GCGACTTGCT CGAGCGCCAT
CTGGACCTGT CGCGCTACAA AGACCGCAAG GACATCACCG ACGACCAGCT CCAGTACATG
GTCGAAACCA TTGGCGACCA GGTCACCAAG CTGACGGCCA CCGAAGGCTA TTTCGTGCCC
AAGGCGACCG CCAAGCTTGA AGGCCCGCAG GACCATCGCA TCGTCAACGT GAAGGTCGAG
CCCGGCCCGC GTACCACCAT CGACAATGTG GCGCTCGACT TCACCGGCGC CGTTACGCAA
GACGCCAAGC GCATCGACGA GTTGAAAAAA TCGTGGAGCC TGCAGCACGG GATGGCGTTC
CGCCAAGCAG GCTGGGACAA AGCCAAGGAC GACGGTCTGG CCGCCCTGCA GAGCAAACGT
TATTACGCGG CCAAGCAGAC GTCGTCGCAG GCGCGTGTCG ATCCGGACGA AAGCAAGGCG
GACCTGTCGG TAGGCTATGA CAGCGGTCCG GCATATACGC TGGGGCCGCT GGACGTGCAG
GGCTTGTCCC GCTATCCCCT CAGCATCATC AACCACGTGA ACCCGTTGCG GGTGGGTGAG
GATTACTCGG CTGATCGACT GCAGTCGCTT CAGGCCGCCA TCCAGGGGCA ACCGTATTTC
TCCAACGCCA TCGTTGACCT GGGCGACGAT CCGAAGAACC CGGTCAACGC GCCGGTGCGG
GTGCGTGTGC GGGAGTACCC GCCCAATCGC ATCACCGGCG GTGTGGGGTA CGGTACGGAC
ACGGGCGCCT CGCTGGAAGG GCGCTATCAA TATCTGAACC TGTTCAGCAA GGCATGGGTG
CTCGACACGC AGGCCCGCCT CGAACAACGC CGCCAGTACC TGTTTGCCGG CGTGACGGTG
CCGCCTGACG ACAAGCAATA CGTCAACAGC CTTTACACCA GCATGGACCG CACCGACACC
TCGGGCACCG AGACGCGCAG CTATCGCTCC GGCTTCAAGC AGACGCGCGT ACGCGGCATC
TATGAGACGT CGTTCACCGT TGATTTCTAC TATGACGACC TGCGGCCAGA AGGCGCCGAG
CGCCAGTTGA GCAAGGCGCT CGTGCCGGGT TTCGCCTGGA CGCGCCGCGA TGTGGACGAC
CCGCTGTTTC CGCGCCGCGG CAACATCATC ACCACGCAGA TCGGCGCGGC AGTGAAAGGC
GTGTTGACCG ACCAATCGTT CGTGCGGTCG TACAGCCGCA TCCGCCAGTT CGTGCCGGTG
GGGCAGCGAG ACATCTTCGT TGCACGCGGC GAGCTGGGCG CGGTCATCAC CTCCGGTGCC
GGCGATGGGG TACCGGCCAC GCTGCGCTTC CGCACGGGCG GCACGCAGTC GGTGCGCGGC
TACGATTTCC AAAGCATCGG TAACGACGTC AACGGCAGCA CGCTGCCGAC CAAGTTCCTC
GTCACCGGCG GGCTGGAGTA TCAACGCTGG TTCCTCCCGC AATGGGGCGC CGCCGTGTTC
TGGGATACCG GCACGGCCAC CGACAACTGG TCGGAGCGCC GCTGGTTCAA TGGGGTGGGT
GTCGGCGTGC GCTGGAAGAG CCCGGTGGGG CCAATCCAGC TCGACATGGC CTACGGCATT
CAGCAGAAGC AGTTCCGGCC GAGCGTGTCG CTGGGCATCG CGTTCTGA
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| Protein sequence | MTGSNRPSRP FRAPRFRLLG LPGAALAAGF ALSLICAPAH AEYDVKIEAP KSIRDLLERH
LDLSRYKDRK DITDDQLQYM VETIGDQVTK LTATEGYFVP KATAKLEGPQ DHRIVNVKVE
PGPRTTIDNV ALDFTGAVTQ DAKRIDELKK SWSLQHGMAF RQAGWDKAKD DGLAALQSKR
YYAAKQTSSQ ARVDPDESKA DLSVGYDSGP AYTLGPLDVQ GLSRYPLSII NHVNPLRVGE
DYSADRLQSL QAAIQGQPYF SNAIVDLGDD PKNPVNAPVR VRVREYPPNR ITGGVGYGTD
TGASLEGRYQ YLNLFSKAWV LDTQARLEQR RQYLFAGVTV PPDDKQYVNS LYTSMDRTDT
SGTETRSYRS GFKQTRVRGI YETSFTVDFY YDDLRPEGAE RQLSKALVPG FAWTRRDVDD
PLFPRRGNII TTQIGAAVKG VLTDQSFVRS YSRIRQFVPV GQRDIFVARG ELGAVITSGA
GDGVPATLRF RTGGTQSVRG YDFQSIGNDV NGSTLPTKFL VTGGLEYQRW FLPQWGAAVF
WDTGTATDNW SERRWFNGVG VGVRWKSPVG PIQLDMAYGI QQKQFRPSVS LGIAF
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