| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2187 |
|---|
| Symbol | |
|---|
| ID | 8019849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2329962 |
|---|
| End bp | 2330489 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644830969 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002982133 |
|---|
| Protein GI | 241663773 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.283277 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCA CGTCGCCGCT GCCTGCTGAT CGCCCCTCTG TGCGGGTGGC GGTGGTGTTG
TGCCGCCGCC CCACGGCCAA CCGTTGGCAG CCGTTCCAAT GGCGGCTGGA GGCGGTCGTT
CCCGACCTTG GCGAATACGG CACGGCGCCG CGCTGCCTGG ACCGTGCCGA AGATGGGTCC
GGCGAAGAGC GCTGGCTCAC GCCCGGCTTT TCCGTCACGT TGTTTCGCGA CGAGGCCGAG
GGTTATTACT TGAACGTGAC CTCAGCCGCG CCCTGCTGGT TTGTACTGTG GCGTCTGGGT
GAGGCTGGCA CAGCGGACGA AGGCCGCGCG ATTCCGCATA CGGTTTCGCT CAGTTACAAC
GAGGCTGGCC GCTGGCTGGA CGGTGGCGAG ACGGTTGAAA ACGTGCCGTT GGACGCCGCG
GCGCTGGAGT GGCTGCAGGC GTACGTGGCA GAAAACTACC GGCCGGAGCC GAAGAAGCGG
CGCCGGCCGG AGTCGTTCCT GCCGCCGGAA GACCGCGCGA AGTTCTGA
|
|---|
| Protein sequence | METTSPLPAD RPSVRVAVVL CRRPTANRWQ PFQWRLEAVV PDLGEYGTAP RCLDRAEDGS
GEERWLTPGF SVTLFRDEAE GYYLNVTSAA PCWFVLWRLG EAGTADEGRA IPHTVSLSYN
EAGRWLDGGE TVENVPLDAA ALEWLQAYVA ENYRPEPKKR RRPESFLPPE DRAKF
|
|---|
| |