| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2185 |
|---|
| Symbol | |
|---|
| ID | 8019847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2327150 |
|---|
| End bp | 2329309 |
|---|
| Gene Length | 2160 bp |
|---|
| Protein Length | 719 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644830967 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
|---|
| Protein accession | YP_002982131 |
|---|
| Protein GI | 241663771 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.900758 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.200774 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACAC TGCTCTGCAG TTGCAATCAC ACCATGCCGA TCGATGCCGA TGCGGTGGGC
GACGCCCTGC GCGCGTCTGA CGCCGCTATC GACGCCCCCA GCAAGACGCA CCACCTGCTG
TGCCGCCGCG AGATCGGCGC GTTCACACAG GCGCTGGATG GCACGGAAGG CGTCGTCGTC
GCCTGCACGC AGGAAAAGGC GCTGTTTGCA GAAGTGGCCG CGCAGCATGA GGGTGTGACC
GCACCGATCC ATTTCGTCAA CGTGCGCGAA ACGGGCGGGT GGTCGGCAGG CGCCAAACGC
GATGCGCGCG GTTTCCGTGC CAAGACAGCG GCACTGCTGG CCGTCGCTGG CTTGCCGGCG
CCGGAGCCAG TGCCGGTGGT CGACTACCGC TCCGACGGCA ACGTGCTGAT CATCGGTCCT
GCCGAGCGTG CCATGCCGTG GGCGGAACGG CTGGCCGACC AACTGAGCGT GGCGGTGCTC
GTCACCGGGC GCGATCGCGC AAGTGGTCCG TTTGTCCCGC CGATGGAGCG CCGCTGGCCG
GTCCACGCGG GCGAGCTGGC GCAGGTGAAC GGCTGGCTCG GCGCGTTCGA GGTGAAGTGG
CGCAACCGCA ATCCGATTGA CCTGGACCGC TGCACGCGCT GCAACGCCTG CATTGATGTC
TGCCCCGAAG GCGCCATCGA CGCGCTCTAC CAGATCGATC TGGATGCATG CCGCGACCAT
CGCGCGTGCG TCAAGGCGTG CGGCGATGCG TTGGCCATCG ATTTCAACCG TGTGGATGCA
CCGCAGGCGC TATCGGGCCA ATTCGACCTG ATCTTCGATC TGAACGACGC GCCGGCGTTT
GCCCAGCACC AGCCGCCGCA GGGCTACTTC CATGCGGGCG CAGACGCGGG CCGCCAACTG
ACGGCATCGC TGGCGTTGCT GCAGATGGTG GGGGAGTTCG AGAAGCCCAA GTTCTTCCAG
TACAAGGAAT CGATCTGCGC GCACGGGCGT AACGGCCAAG TGGGCTGCAA CGCTTGCGTG
GACGTGTGTT CGGCGTCGGC GATTGCGTCG CAGTGGAAGG ACGGCCGCGG CAGCGTGCGC
GTCACGCCCA ATCTCTGTGT GGGCTGCGGT GCGTGTACGA CCGCGTGTCC GACCGGCGCC
ATCACCTATG CCTATCCGAG CGCGCCGTAC CAGGGGCGCA AGCTGAAGAC GCTGCTCGGC
ACGTATGCAT CGGCGGGTGG GCGTGATGCC GTGGTTCTGC TGCATAACGG TGGGCGGGGC
CGCACGCTGA TCGAGCAACT GGGCCGTGCC GCGCGTATCG GCAAGGCCCA GGGCGTGCCC
GTGAATGTGC TGCCCGTCGA GGTCTTCCAT TCGGCATCGA CGGGTTTGGA CCTGTGGCTC
TCCGCATTGG CTTACGGCGC CGCGCGCATC GCCATTCTCC TGACGGAAGA CGACGCACCG
CAGTACCGTG CGATGCTCGC CGAGCAGGTC GCCGTGGCGC AGGCCGTGCT GGAGGGGCTT
GGCGAACCGG CGGGTGCGGC GGGTGTGGTG TTGATCGACG TGGCGGATGC CGCTGCGCTC
GACGCGCGCC TCAGTGGTGC TGATGTTTCG GGCCCCCTGC GTGGCTTTCG CCGTGACATG
CCGGCCGCCA CCTTCGCGGT GGCCGCTGCC AAGCGCGAGG CACTCGATTT CGCGCTCGAC
CATCTTGCAC GCCACGCCAA GGCCATTGAG GCCATCATCC CGCTGCCAGC CGGTGCGCCG
TTTGGCGCCA TCACCGTGAA CCGCGAACGC TGCACGCTGT GCATGGCTTG CGTGGGCGCG
TGCCCGTCGC AGGCGCTGCG TGATCAGGCC GAGCGGCCCG TGCTGGCCAT GATCGAGCGC
AACTGCGTCC AATGCGGCCT GTGCGAGACC ACGTGCCCTG AAAGCGCCAT CGCCCTCGTG
CCGCGTTTGA ACCTGTCGGC AGAAGCCCGC CAATCGGCCA CGCTCAACGA GGCGCAGCCG
TTCCACTGCA TCCGCTGCAA CAAGCCGTTC GGCACCGCGC AGATGGTCGC GACGATGCTG
GCCAAGCTGG GCGCGCATCC GGCGTTCTCC GGCGCCGCCG CCGAGCGCCT CAAGATGTGC
AGCGATTGCC GCGTGATCGA CATGATGCAG CACGGCGAAC GCCCGGGCGC CCCGCACTGA
|
|---|
| Protein sequence | MPTLLCSCNH TMPIDADAVG DALRASDAAI DAPSKTHHLL CRREIGAFTQ ALDGTEGVVV
ACTQEKALFA EVAAQHEGVT APIHFVNVRE TGGWSAGAKR DARGFRAKTA ALLAVAGLPA
PEPVPVVDYR SDGNVLIIGP AERAMPWAER LADQLSVAVL VTGRDRASGP FVPPMERRWP
VHAGELAQVN GWLGAFEVKW RNRNPIDLDR CTRCNACIDV CPEGAIDALY QIDLDACRDH
RACVKACGDA LAIDFNRVDA PQALSGQFDL IFDLNDAPAF AQHQPPQGYF HAGADAGRQL
TASLALLQMV GEFEKPKFFQ YKESICAHGR NGQVGCNACV DVCSASAIAS QWKDGRGSVR
VTPNLCVGCG ACTTACPTGA ITYAYPSAPY QGRKLKTLLG TYASAGGRDA VVLLHNGGRG
RTLIEQLGRA ARIGKAQGVP VNVLPVEVFH SASTGLDLWL SALAYGAARI AILLTEDDAP
QYRAMLAEQV AVAQAVLEGL GEPAGAAGVV LIDVADAAAL DARLSGADVS GPLRGFRRDM
PAATFAVAAA KREALDFALD HLARHAKAIE AIIPLPAGAP FGAITVNRER CTLCMACVGA
CPSQALRDQA ERPVLAMIER NCVQCGLCET TCPESAIALV PRLNLSAEAR QSATLNEAQP
FHCIRCNKPF GTAQMVATML AKLGAHPAFS GAAAERLKMC SDCRVIDMMQ HGERPGAPH
|
|---|
| |