Gene Rpic12D_2181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2181 
Symbol 
ID8019843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2322188 
End bp2322856 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content66% 
IMG OID644830963 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002982127 
Protein GI241663767 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.768986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0520829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA TGAAATTCAT CTGTGACAGC GAGCGCTGCA TCGAATGCAA CGCCTGCGCC 
ACGGCCTGCA AGAACGAACA CGAAGTGCCC TGGGGCGTGA ACCGGCGCCG CGTGGTCACC
ATCAACGACG GCATGATCGG CGCGGAGAAA TCCATCTCGG TGGCGTGCAT GCATTGCTCC
GATGCGCCGT GCATGGCGGT CTGCCCGGTC GACTGCTTCT ACCGCACTGA AGACGGCGTG
GTGCTGCACG ACAAGGACGT CTGCATCGGC TGTGGCTACT GCTCGTATGC GTGCCCGTTC
GGCGCGCCGC AGTTCCCGAG CCAGGGCACG TTCGGCGTGC GCGGCAAGAT GGACAAGTGC
ACGTTCTGCG CGGGCGGCCC CGAGAAGAAC GGCAGCGAGG AAGAATTCGA GAAGTACGGC
CGCAACCGCC TGGCCGAAGG GAAGCTTCCG CTGTGCGCGG AAATGTGCTC GACGAAGGCG
CTGCTCGGCG GCGATGGCGA TGTGATTTCC GACATCCTGC GCAACCGCGT CATGAAACGC
GGGAAGGGCG CTGAGTTGTT CGGATGGGGC ACGGCTTACG GCGGCGCGCA AGGCAAGGGC
GGTCAGGCGG CGCCGGCAAT TCCGGCCGCA CCGGCCACGC CGGCTTCGGC GTCGGGGGCG
CAATCATGA
 
Protein sequence
MARMKFICDS ERCIECNACA TACKNEHEVP WGVNRRRVVT INDGMIGAEK SISVACMHCS 
DAPCMAVCPV DCFYRTEDGV VLHDKDVCIG CGYCSYACPF GAPQFPSQGT FGVRGKMDKC
TFCAGGPEKN GSEEEFEKYG RNRLAEGKLP LCAEMCSTKA LLGGDGDVIS DILRNRVMKR
GKGAELFGWG TAYGGAQGKG GQAAPAIPAA PATPASASGA QS