Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2181 |
Symbol | |
ID | 8019843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2322188 |
End bp | 2322856 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644830963 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Protein accession | YP_002982127 |
Protein GI | 241663767 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.768986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0520829 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACGCA TGAAATTCAT CTGTGACAGC GAGCGCTGCA TCGAATGCAA CGCCTGCGCC ACGGCCTGCA AGAACGAACA CGAAGTGCCC TGGGGCGTGA ACCGGCGCCG CGTGGTCACC ATCAACGACG GCATGATCGG CGCGGAGAAA TCCATCTCGG TGGCGTGCAT GCATTGCTCC GATGCGCCGT GCATGGCGGT CTGCCCGGTC GACTGCTTCT ACCGCACTGA AGACGGCGTG GTGCTGCACG ACAAGGACGT CTGCATCGGC TGTGGCTACT GCTCGTATGC GTGCCCGTTC GGCGCGCCGC AGTTCCCGAG CCAGGGCACG TTCGGCGTGC GCGGCAAGAT GGACAAGTGC ACGTTCTGCG CGGGCGGCCC CGAGAAGAAC GGCAGCGAGG AAGAATTCGA GAAGTACGGC CGCAACCGCC TGGCCGAAGG GAAGCTTCCG CTGTGCGCGG AAATGTGCTC GACGAAGGCG CTGCTCGGCG GCGATGGCGA TGTGATTTCC GACATCCTGC GCAACCGCGT CATGAAACGC GGGAAGGGCG CTGAGTTGTT CGGATGGGGC ACGGCTTACG GCGGCGCGCA AGGCAAGGGC GGTCAGGCGG CGCCGGCAAT TCCGGCCGCA CCGGCCACGC CGGCTTCGGC GTCGGGGGCG CAATCATGA
|
Protein sequence | MARMKFICDS ERCIECNACA TACKNEHEVP WGVNRRRVVT INDGMIGAEK SISVACMHCS DAPCMAVCPV DCFYRTEDGV VLHDKDVCIG CGYCSYACPF GAPQFPSQGT FGVRGKMDKC TFCAGGPEKN GSEEEFEKYG RNRLAEGKLP LCAEMCSTKA LLGGDGDVIS DILRNRVMKR GKGAELFGWG TAYGGAQGKG GQAAPAIPAA PATPASASGA QS
|
| |