Gene Rpic12D_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2179 
Symbol 
ID8019841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2320759 
End bp2321922 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content65% 
IMG OID644830961 
Productformate dehydrogenase, gamma subunit 
Protein accessionYP_002982125 
Protein GI241663765 
COG category[C] Energy production and conversion 
COG ID[COG2864] Cytochrome b subunit of formate dehydrogenase 
TIGRFAM ID[TIGR01583] formate dehydrogenase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.364942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0604921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACTT CCTGGAAACA CCTTGTGATG GCCGTGCTGC TCGGCGGCGT GGCGGCGTTG 
GCGAGCGCGC AGCAGCCGGC CACTGCGCCG GCGGCCAACA CCGCCCCGGT CAATCCGGCC
GTACAACCGG CGCAGCCGTT CTCCAACATC GTCTCGGAGA ACGTGTTTGA TCTGCAGAAG
CGCGATCTCG CCAAAGAGGC GCAGGACCAG GCCGCACGCC GCGCGACGCA ACCGGGCAAC
AACGCGCCCG TCTGGCGCGA GGTGAACTCC GACCAAGCAC ATTACGCCAG CATTCCCGGG
TTGGAAGCCG GCGTGCTGAT CCAGCGCACC GGGCAGAAAT GGCGGCTATT CCGCAATGGC
GTGATCACCG TGTGGGGCGG TTGGCTCATG GTGCTGGTGC CGTCGGCCAT CCTGGCCTTC
TTCCTTTGGC GCGGCATGAT CCCGCTAAAA GAAGCGCCGA CGGGCCGCAA GATCGAGCGC
TTCACGCCCA CCGAGCGCTA CGTGCACTGG ACGATGGCGA TCTCCTTTGT CACGCTCGGC
GTGTCGGGCA TCGTCATGCT GTGGGGCAAG CATTTCCTGT TGCCGATCCT CGGTCATCAG
TTGTTCGGTT GGCTGACGTA TTTGCTGAAA AACCTGCACA ACCTGGTGGG CCCGCTCTTC
ACGGTCAGCA TCATCGTGGC CTTCGTGATT TGGGTGCGGG ACAACCTGCC GCGCCAGGGC
GACGTGAAAT GGCTGCTGAG CCTGGGTGGC ATGTTTGCCG GAGAGCACGG CGCCGAAGTG
CCGTCGCACC GCTTCAATGC GGGTGAGAAA CTCTGGTTCT GGGGCGGCCT CGTCGTCTTC
GGGCTGATCC TGTCTGCCTC GGGCTGGACG CTCGATCGCA TCGTCCCGGG CGTGGATTAC
TACCGCAGCA CGATGCAACT GGCCGAGGTC ATTCACGCGA TCGCGGCGGT GGGCATGATG
AGCATGTCGC TGGGCCACAT CTACATGGGC ACGATCGGCA TGGAAGGCGC TTACCGCGCC
ATGCGTGACG GTTATGTCGA CGAGGCCTGG GCGAAGGAGC ACCACGAACT TTGGTACGAC
GACGTCAAGG CCGGCAAGAT CCCCGCGCAG CGGTCCCAGC CGCCCGCGGC GTCGGCGCCG
AGCGAGCAGC CCGCCAAGTC ATGA
 
Protein sequence
MGTSWKHLVM AVLLGGVAAL ASAQQPATAP AANTAPVNPA VQPAQPFSNI VSENVFDLQK 
RDLAKEAQDQ AARRATQPGN NAPVWREVNS DQAHYASIPG LEAGVLIQRT GQKWRLFRNG
VITVWGGWLM VLVPSAILAF FLWRGMIPLK EAPTGRKIER FTPTERYVHW TMAISFVTLG
VSGIVMLWGK HFLLPILGHQ LFGWLTYLLK NLHNLVGPLF TVSIIVAFVI WVRDNLPRQG
DVKWLLSLGG MFAGEHGAEV PSHRFNAGEK LWFWGGLVVF GLILSASGWT LDRIVPGVDY
YRSTMQLAEV IHAIAAVGMM SMSLGHIYMG TIGMEGAYRA MRDGYVDEAW AKEHHELWYD
DVKAGKIPAQ RSQPPAASAP SEQPAKS