| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2168 |
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| Symbol | |
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| ID | 8019830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2309445 |
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| End bp | 2310896 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644830950 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002982114 |
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| Protein GI | 241663754 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.647242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGC CAAACGGTTC CGCCATGTCT TCGTGTCACG CCAACACCAT TGATACCGCT
GCCCCGGCTC ACTTGCAGCC CGATCTCAGC CGTTGGCGCC GCAACGCCAC GCTGGGCATT
CTCACGTCGG GCGTGTTCAT GGCGGTGCTC GACACCACCG TGGTCAACGT GGCGCTCATC
GCCATGCGCG ACAGCCTGCA CGGCAGCGTC GCAGAACTTG CCTGGATTGT TGACGCTTAC
ACGCTGGCGT TTGCCGCTTT CATCCTCACG GGCGGTTTGC TGAGCGATCG CATTGGCGCG
CGCACCGTGT TCATGGCGGG AATGGCGGTC TTCATTGTTG CGTCGGCCGG TTGTGGAGTG
GCGCCTTCCG TGGCCACGCT GATTGCTGCG CGCATCCTGC AGGGCGTGGG CGCGGCGATG
TTCCTGCCGA GTTCGCTGTC GCTCATTCGC AGCACATTTC AAGATCCGCG CGAGCGCGCA
TGGGCCATCG GCCTGTGGGG CGCCATCGTA GCGACTGCCG CAGCCGTGGG CCCGGCGGTG
GGCGGCGTGC TGGTCGACAC ATACGGCTGG CGCAGCGCCT TCCTGATCAA CGTGCCGCTG
GGCGTGGTCG GCATGCTGGG TACGTGGATG ATCGTGCGCA ACGACCAGCC GGCACGGGCG
AAGCCGTTCG ACTGGGCGGG GCAGGTGACG AGCGCGGTGA TGCTCGCAGC GCTATGTTTC
GCTGCGATTG AGTGGCCGGT GCGCGGCGCG CAATCGCCGT GGGTGTGGGG TGCCGCGCTG
CTGACGGTGG CGGCCGGTTC GCTGTTCGTT ATGGCCGAAC GCCGTGCGCG GGCGCCGCTC
GTGCCGCTGG CCTGGCTGGG GCATCGCACG CTGGGCGCGG TCAACGGCGT GGGGTTCCTA
CTGAATTTCG GCTATTACGG TGCACTGTTC GTGCTGAGCC TGCATTTGCA GAACGTCGAA
CATCTCAGCG CACGCCAGAC GGGCCTCGTC ATGTTGCCGA TGGCGATCAG CCTGTCGGCG
GGCAATATCT TCGCCGGCAA GTTGATGGCG CATTTTTCTA TGCCGACGAT GATGCTCAGC
GGCCTCGTGA TCGGCGCATC GGGTTTGCTG GCCACGTCGG CCGCGCTGAC AGGGCAGGTG
CACCCCTGGG TGGTGAGTGC AGCGATGGTG GCGTACGGCG GCGGTACCGC GCTGGCGATT
GCGCCGATGA CCTCGACGAT CCTGTCTGCG GCGCCGGGGG AGCTGGCCGG CACGGCGTCG
GGCTTGCTCA ACGCCGCGCG GCAGACGGGC AGTTTGCTGG GCGTGGCAGC GGCGGGCGCC
GTCGTGACGG TGGTGCCCGA GCTGGCGCAC GCCTCGCCAA TGGTGTTTGG CCTCATGACG
CTGTCGTACG CCGGCGCGAT GGCGATGGCG TGGATCAGCC GACGCCCGGC CGCCACCGCG
CTGGCTGCCT GA
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| Protein sequence | MKLPNGSAMS SCHANTIDTA APAHLQPDLS RWRRNATLGI LTSGVFMAVL DTTVVNVALI
AMRDSLHGSV AELAWIVDAY TLAFAAFILT GGLLSDRIGA RTVFMAGMAV FIVASAGCGV
APSVATLIAA RILQGVGAAM FLPSSLSLIR STFQDPRERA WAIGLWGAIV ATAAAVGPAV
GGVLVDTYGW RSAFLINVPL GVVGMLGTWM IVRNDQPARA KPFDWAGQVT SAVMLAALCF
AAIEWPVRGA QSPWVWGAAL LTVAAGSLFV MAERRARAPL VPLAWLGHRT LGAVNGVGFL
LNFGYYGALF VLSLHLQNVE HLSARQTGLV MLPMAISLSA GNIFAGKLMA HFSMPTMMLS
GLVIGASGLL ATSAALTGQV HPWVVSAAMV AYGGGTALAI APMTSTILSA APGELAGTAS
GLLNAARQTG SLLGVAAAGA VVTVVPELAH ASPMVFGLMT LSYAGAMAMA WISRRPAATA
LAA
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