Gene Rpic12D_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2164 
Symbol 
ID8019826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2301985 
End bp2303178 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content64% 
IMG OID644830946 
ProductHemY domain protein 
Protein accessionYP_002982110 
Protein GI241663750 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3071] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.757442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.301743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGGG TATTCTGGGT CGCGCTCCTG TTTGCCGCCG CCGTCGGGTT GGCGCTGTTT 
ACGGAACTCA ATCTGAGCAA CGTCGTGCTG TTCTATCCGC CTTACCGGGT GGAGATGTCG
CTGAACTTCG TGCTGGCTGC GCTGCTGGCG ACCTTCGTGG TGCTGCATCT TGTGATGCGC
CTTTTCCACC ATGTGGCCGG GATGCCAGCG CGTGCCGCGG CGTATCGCGA GCGCAACCGC
ATTCTGAAGG CTTCGGCGGC GCTGCGCGAA GCGATGGAGA GCCTGTTTGC CGGCCGCTTC
GGCCATGCGG AACGCCAGGC GCGCGAAGCC CAGGCCTGGG AGCCGCAGCG CGAAACGGCC
GCACTGATCG GGGCACGCGC CGCACACCGC ATGCAGGAAA CCGAGCGCCG CGACGCTTGG
ATGGCCGAAG TCGCCTCGCC TGATCGTGAG CAGGCGAAGC TGGTGTCGAT GGCGGAACTG
CTGGTCGATG CGCGCGATGC GGAAGGTGCG CTGGAAAAAA TCGCGCAATT GCAATCACAG
GGCTCGCGGC AAATTCAGGC GCAGCGCATT GCGTTGCGCG CGCATCAGCA TCTGAAGAAC
TGGGGCGAGG TGCTGCGCCT CACGCGCGCG CTGGAAAAGC GTAACGCCAT CCATTCGGTG
CTGGCCGCGC GCCTCAAGCA GATGGCCTGT GAAACGCTGC TGGCCGAGCG CCGGCACGAT
GCCGATGCCC TCAACAGCTT CTGGCGCGAA CTCACTCCGG AGGAGCGCCG CTCACCGCGC
ATCGCTTCGC AGGCGGCGCT GTACTTTGCG CAGCTGGGTC GCACCGATGA TGCGAAACGC
ATCGTCGAAG ACGGCCTGAA GGCGCATTGG GATGGCCGCC TGATCCGCCG CTATGCGGAT
TGCGCGGTGC CCGGCAAGGC GTTGCCGCTG ATCCAGCAAG CCGAGAAATG GCTTGGCCAG
CATCCGGTGG ATGCCGACCT GTTCTACACG CTCGGCATGC TGTGCTTCAA GGAGCAGCTC
TGGGGCAAGG CGCAGTCGAG CCTGGAATCG GCGTTGAAGT ATGCCGATGC AGATCATTCA
GGCAACCTGC GCGCCCATGC GCACCTGGCA CTGGCGCAGA TGTTCGAGCA GACGGAACGG
ATGGAAGAGG CCCAGCGACA CTATCGGCAA AGCGCCTTGC TTGCCGTGAA ATGA
 
Protein sequence
MRWVFWVALL FAAAVGLALF TELNLSNVVL FYPPYRVEMS LNFVLAALLA TFVVLHLVMR 
LFHHVAGMPA RAAAYRERNR ILKASAALRE AMESLFAGRF GHAERQAREA QAWEPQRETA
ALIGARAAHR MQETERRDAW MAEVASPDRE QAKLVSMAEL LVDARDAEGA LEKIAQLQSQ
GSRQIQAQRI ALRAHQHLKN WGEVLRLTRA LEKRNAIHSV LAARLKQMAC ETLLAERRHD
ADALNSFWRE LTPEERRSPR IASQAALYFA QLGRTDDAKR IVEDGLKAHW DGRLIRRYAD
CAVPGKALPL IQQAEKWLGQ HPVDADLFYT LGMLCFKEQL WGKAQSSLES ALKYADADHS
GNLRAHAHLA LAQMFEQTER MEEAQRHYRQ SALLAVK