Gene Rpic12D_2160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2160 
Symbol 
ID8019822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2297548 
End bp2298075 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content62% 
IMG OID644830942 
Productinorganic pyrophosphatase 
Protein accessionYP_002982106 
Protein GI241663746 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.521563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.987317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCA ACAACGTCTC GCCGGGCAAG GACATCCCCA ACGACTTCAA CGTCATCATC 
GAGATCCCGG CGCAAAGCGA TCCGGTCAAG TACGAAGCCG ACAAGGAAAC CGGCCTGCTG
TTCGTGGACC GCTTCGTTGG CACCGGCATG CGCTACCCGG CCAACTACGG CTTCATCCCG
CAGACGCTGT CGGGCGACGG TGACCCGGTC GACGTGCTGG TCGTCACGCC GTTCCCGCTC
ATCCACGGGT GCGTGGTGCG CTGCCGTGCG CTGGGCATGC TGAAGATGAC GGACGAATCG
GGCGTGGACG CGAAGCTGGT TGCCGTGCCT GTCAACAAGC TCAGCCCGGC CACCGCCCAC
ATGACCGATC TGTCGGACAT CGGCCAGAAC CTGCTGGACC AGATCAAGCA CTTCTTCGAG
CACTACAAGG CGCTGGAAGC CGGCAAGTGG GTCAAGGTCG AAGGCTGGGG CGGCATTGAA
GAAGCCCACA AGGAAATCGT CGACGGCGTG GCCAACTATA AGAAGTAA
 
Protein sequence
MSFNNVSPGK DIPNDFNVII EIPAQSDPVK YEADKETGLL FVDRFVGTGM RYPANYGFIP 
QTLSGDGDPV DVLVVTPFPL IHGCVVRCRA LGMLKMTDES GVDAKLVAVP VNKLSPATAH
MTDLSDIGQN LLDQIKHFFE HYKALEAGKW VKVEGWGGIE EAHKEIVDGV ANYKK