Gene Rpic12D_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2158 
Symbol 
ID8019820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2294066 
End bp2295703 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content65% 
IMG OID644830940 
ProductNAD synthetase 
Protein accessionYP_002982104 
Protein GI241663744 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0171] NAD synthase 
TIGRFAM ID[TIGR00552] NAD+ synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.339223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCT CTGTCGCTCT CGCCCAGATC AACTGCACCG TCGGCGATTT CGCCGGCAAT 
GCTTCCCGCA TCGTCGCTGC CGCGCGCGAA GCGCACCAGG CTGGTGCGCG CATCCTGCTC
ACGCCGGAAC TGTCCCTTAC CGGTTATCCG CCCGAAGACC TGCTGCTGCG CCCGGCCTTC
ATCGATGCGA GCGCGCGTGC GCTCGACGCG CTCATCGCCG AGCTGGCGGC CTTCCCGGGT
TTGCACGTGC TGATCGGGCA CCCGCAACTC TCGCTGGAAG CCCCGGCGCC CGGCGTGCTG
CCCAAGCCCA CGAACAGCGT CACGGTGGCC GTGGATGGCC GTGTGGTCGG CCGGTACAAC
AAGCTGGAAC TGCCCAACAA CGAGGTCTTC GACGAGAAGC GCTACTTCCA GCCCGGCACC
GAGCCCTTTG TGTTCGAAGT GGACGGCACG CGCTTCGGCG TCATCATCTG CGAAGACGCC
TGGTACGCCA CGGCCACGGC CTATGCCAAG GCCGCCGGCG CGCAGGTTGT GTTGATCCCC
AACGCCTCGC CGTACCATCT CGACAAGGAA GACCTGCGCG AGCGGATCAT CGGTGCCCGT
GTGAAGGAAT CGGGCTTGCC GCATGTGTAC GCAAACCTCG TCGGCGGGCA GGATGAACTC
GTGTTCGACG GGGGCTCGTT CGTGCTTGAT GCCGAAGGCA ACGTTGTCGT GCGGATGGGG
CAGTTTGTGG AGGGCGTCGG CTACGTTCAG TTCGATGGCG GACGCGCCCT GCCGGGTACG
ATCGTGCCGG AGGCCTCGCT CGAAGCCCAG GTGTATGAGG CGCTCAAGCT GGGCGTGCGC
GACTACCTCG GCAAGAACGG CTTCCCGGGC GCGATCATCG GCTTGTCGGG CGGCGTCGAT
TCGGCGTTGG TGCTTGCGAT TGCCGTCGAT GCGCTGGGCG CCGACCGTGT ACGCGCGGTG
ATGATGCCCT CGCGCTACAC GGCAGATATC TCGTGGGTGG ACGCGCGCGA CATGGCGGCC
CGCCTTGGCG TGCAGTACGA CGAAATCGCC ATCAGCCCGA TGTTCGACGC ATTCAAGGGC
GCACTGGCGG AGGACTTCCG CGGGTTGCCC GAAGATGCGA CGGAAGAAAA TATCCAAGCG
CGCATTCGCG GCACGCTGCT GATGGCGTTG TCCAACAAGA GCGGCCGCAT CGTCCTCACC
ACTGGCAACA AGAGCGAAAT GGCCGTCGGT TACTGCACGC TATACGGCGA CATGGCCGGC
GGTTTTGCCG TCATCAAGGA CATCTTCAAG ACGCTGGTCT ACCGGCTGTG CCGCTATCGC
AATGCGTTGT CGGAAGTGAT TCCCGAGCGC ATCCTGACCC GCGCGCCATC GGCCGAGCTG
CGCGAGAACC AGACCGACCA GGACAGCCTG CCCGAATACG ATGCGCTCGA CGCCATCGTG
CAGCGCTACA TGGAGCAGAA CCAGCCGGTG GCCGACATCA TCGCGGATGG GTTTGCCGAG
GCCGACGTAC AGAAGATCGT GCGCCTCATC AAGATCAACG AATACAAGCG GCGTCAGGCG
CCGGTGGGCA TTCGCGTGAC GCAGCGCGCG TTCGGCCGCG ACTGGCGGTA TCCGATCACG
TCGCGCTTCA AAGAGTAA
 
Protein sequence
MTVSVALAQI NCTVGDFAGN ASRIVAAARE AHQAGARILL TPELSLTGYP PEDLLLRPAF 
IDASARALDA LIAELAAFPG LHVLIGHPQL SLEAPAPGVL PKPTNSVTVA VDGRVVGRYN
KLELPNNEVF DEKRYFQPGT EPFVFEVDGT RFGVIICEDA WYATATAYAK AAGAQVVLIP
NASPYHLDKE DLRERIIGAR VKESGLPHVY ANLVGGQDEL VFDGGSFVLD AEGNVVVRMG
QFVEGVGYVQ FDGGRALPGT IVPEASLEAQ VYEALKLGVR DYLGKNGFPG AIIGLSGGVD
SALVLAIAVD ALGADRVRAV MMPSRYTADI SWVDARDMAA RLGVQYDEIA ISPMFDAFKG
ALAEDFRGLP EDATEENIQA RIRGTLLMAL SNKSGRIVLT TGNKSEMAVG YCTLYGDMAG
GFAVIKDIFK TLVYRLCRYR NALSEVIPER ILTRAPSAEL RENQTDQDSL PEYDALDAIV
QRYMEQNQPV ADIIADGFAE ADVQKIVRLI KINEYKRRQA PVGIRVTQRA FGRDWRYPIT
SRFKE