Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2154 |
Symbol | |
ID | 8019816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2291699 |
End bp | 2292364 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644830936 |
Product | Smr protein/MutS2 |
Protein accession | YP_002982100 |
Protein GI | 241663740 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.133622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.857394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCG CTCCTTCCCC CGCCAACAAG CTCAGCCTGA CCGACCTGGC CAGTCTGCGT GACCAGCTCA AGCACGAGAC GGAGGCACGC GAAGCCGAGC GGCAGCGCGC TGAAGCCGCG GCACGCAAGG CCGCCGAAGA GGCCAACGTG TTCCGAGCCA GCATCGGCGA GGTCAGCGCG CTGCGCCAGA ACAAGCGCGT TGAGCATCCG CGCAATCCGC CCGCGCCCGA ACCCGTGCAC TCGCGCGCCG AAGAGCAGAC CGTGCTGCGC GATTCCCTGT CGGATGAATT CGACGTGGAC AACTTGCTCG AAACCGACGA CACGCTGTCC TACCGGCGCC CCGGCATTGG CGACGACGTG CTCAAAAAGT TGCGCCGCGG CGAGTGGGCC ACGCAAGACC AGATCGACCT GCACGGCATG CGCCGCGAAG AAGCCCGCGA GGCGCTGGCC GCCTTCCTGC GCCGGGCGGT ACAGCGCGGC ATCCGCTGCG TGCGCGTGAT CCACGGCAAA GGCCTCGGCT CGCCCGACAA AACGCCGGTG CTCAAGGGCA AGGTGCGCTC GTGGCTGGTG CAGAAGGAAG AAGTGATCGC TTTTGTCGAG CCACGCAACA CGGCCGGTGG CGCGGGCGCG GTGCTGGTAC TGCTGCGCCA GCCGTACGGC TCCTGA
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Protein sequence | MKRAPSPANK LSLTDLASLR DQLKHETEAR EAERQRAEAA ARKAAEEANV FRASIGEVSA LRQNKRVEHP RNPPAPEPVH SRAEEQTVLR DSLSDEFDVD NLLETDDTLS YRRPGIGDDV LKKLRRGEWA TQDQIDLHGM RREEAREALA AFLRRAVQRG IRCVRVIHGK GLGSPDKTPV LKGKVRSWLV QKEEVIAFVE PRNTAGGAGA VLVLLRQPYG S
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