Gene Rpic12D_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2154 
Symbol 
ID8019816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2291699 
End bp2292364 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content68% 
IMG OID644830936 
ProductSmr protein/MutS2 
Protein accessionYP_002982100 
Protein GI241663740 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.133622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.857394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCG CTCCTTCCCC CGCCAACAAG CTCAGCCTGA CCGACCTGGC CAGTCTGCGT 
GACCAGCTCA AGCACGAGAC GGAGGCACGC GAAGCCGAGC GGCAGCGCGC TGAAGCCGCG
GCACGCAAGG CCGCCGAAGA GGCCAACGTG TTCCGAGCCA GCATCGGCGA GGTCAGCGCG
CTGCGCCAGA ACAAGCGCGT TGAGCATCCG CGCAATCCGC CCGCGCCCGA ACCCGTGCAC
TCGCGCGCCG AAGAGCAGAC CGTGCTGCGC GATTCCCTGT CGGATGAATT CGACGTGGAC
AACTTGCTCG AAACCGACGA CACGCTGTCC TACCGGCGCC CCGGCATTGG CGACGACGTG
CTCAAAAAGT TGCGCCGCGG CGAGTGGGCC ACGCAAGACC AGATCGACCT GCACGGCATG
CGCCGCGAAG AAGCCCGCGA GGCGCTGGCC GCCTTCCTGC GCCGGGCGGT ACAGCGCGGC
ATCCGCTGCG TGCGCGTGAT CCACGGCAAA GGCCTCGGCT CGCCCGACAA AACGCCGGTG
CTCAAGGGCA AGGTGCGCTC GTGGCTGGTG CAGAAGGAAG AAGTGATCGC TTTTGTCGAG
CCACGCAACA CGGCCGGTGG CGCGGGCGCG GTGCTGGTAC TGCTGCGCCA GCCGTACGGC
TCCTGA
 
Protein sequence
MKRAPSPANK LSLTDLASLR DQLKHETEAR EAERQRAEAA ARKAAEEANV FRASIGEVSA 
LRQNKRVEHP RNPPAPEPVH SRAEEQTVLR DSLSDEFDVD NLLETDDTLS YRRPGIGDDV
LKKLRRGEWA TQDQIDLHGM RREEAREALA AFLRRAVQRG IRCVRVIHGK GLGSPDKTPV
LKGKVRSWLV QKEEVIAFVE PRNTAGGAGA VLVLLRQPYG S