Gene Rpic12D_2145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2145 
Symbol 
ID8019807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2280675 
End bp2281991 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content65% 
IMG OID644830927 
Productseryl-tRNA synthetase 
Protein accessionYP_002982091 
Protein GI241663731 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.119162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.699626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGATA TCCAACTGCT GCGCAAAGAC ATCGACGCCG TCGCCGCGCG CCTCAAAGAT 
CGCTGTTACG TGCTCGACGT TGCCGGCTTT GCCGCACTCG AGGCGGAACG CAAGGCCATC
CAGACCCGCA CCGAAGAGCT GCAGGCCCGC CGCAACAGCC TGTCCAAGCA GATTGGCATG
CTCAAGGGCA AGGGCGAGGA CGCATCGGGC GTGATGGCCG AGGTGTCGGG CATCGGCGAC
GAGCTGAAGG CGTCTGCCGC GCAACTCGAC GTGGTGCAGG CGAAGTTGCA GGACCTGATG
CTGTCGATCC CGAACCTGCC GCACGAAAGC GTGCCGGCCG GACGCGACGA GACGCAGAAC
GTGGAAGTGC GCCGCGAGGG CACGCCGCGC ACGTTCGATT TCCCGGTCAA GGACCACGTC
GATCTGGGCG CCGCGCTGGG GCTGGATTTT GATGCGGGTG CCAAGCTGTC CGGCGCGCGA
TTCACCGTCC TGAAAGGGCA GGTGGCGCGC CTGCATCGCG CGCTTGCGCA ATTCATGCTC
GACACGCACA CGCTGGAGCA CGGCTACACC GAGGCATACG TGCCGTACAT CGTCAACGCT
GCATCGATGC GTGGCACCGG TCAGTTGCCG AAGTTCGAGG AAGACCTGTT CCGCGTGCCG
CGCAAGATGG GGCACAGTGC CGAAGGCGAA GACGGCGAAC GTGTCGAGAA CTTCTACCTG
ATCCCGACCG CCGAAGTGCC GCTCACGAAC CTCGTGCGCG ATGAGATCGT CGCCGCCGAT
GCGCTGCCGA TGATGTTCGC GGCGCATTCG CCGTGCTTCC GTTCCGAAGC CGGCTCGTAC
GGCAAGGACA CACGCGGCAT GATCCGCCAG CACCAGTTCG ACAAGGTGGA GATGGTGCAG
ATCGTGCAGC CCCAAACGTC GTTCGACGCG CTGGAAGCCA TGACGAACGC CGCGGAGAAC
ATCCTGCGCA AGCTGGAATT GCCGTTCCGC ACCGTCGTGC TGTGCACCGG CGACATGGGC
TTCGGCAGCA CCAAGACGTA CGACATCGAG GTGTGGATTC CGGCGCAGAA CACCTACCGC
GAAATCAGCT CGTGCTCGAA CATGGGCGAC TTCCAGGCGC GCCGCATGCA AGCGCGTTTC
CGCAACGCGC AGGGCAAGCC GGAGCTGGTT CACACGCTCA ACGGCTCGGG CCTCGCGGTG
GGCCGTGCGC TGGTTGCCGT GCTGGAGAAC TACCAGAATG CGGATGGCTC GGTCACGGTG
CCGACGGTGC TGCGCCCGTA CCTGGGAGGC CAGGAAGTGC TGAAACCGGC TGCTTGA
 
Protein sequence
MLDIQLLRKD IDAVAARLKD RCYVLDVAGF AALEAERKAI QTRTEELQAR RNSLSKQIGM 
LKGKGEDASG VMAEVSGIGD ELKASAAQLD VVQAKLQDLM LSIPNLPHES VPAGRDETQN
VEVRREGTPR TFDFPVKDHV DLGAALGLDF DAGAKLSGAR FTVLKGQVAR LHRALAQFML
DTHTLEHGYT EAYVPYIVNA ASMRGTGQLP KFEEDLFRVP RKMGHSAEGE DGERVENFYL
IPTAEVPLTN LVRDEIVAAD ALPMMFAAHS PCFRSEAGSY GKDTRGMIRQ HQFDKVEMVQ
IVQPQTSFDA LEAMTNAAEN ILRKLELPFR TVVLCTGDMG FGSTKTYDIE VWIPAQNTYR
EISSCSNMGD FQARRMQARF RNAQGKPELV HTLNGSGLAV GRALVAVLEN YQNADGSVTV
PTVLRPYLGG QEVLKPAA