Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2145 |
Symbol | |
ID | 8019807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2280675 |
End bp | 2281991 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644830927 |
Product | seryl-tRNA synthetase |
Protein accession | YP_002982091 |
Protein GI | 241663731 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.119162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.699626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGATA TCCAACTGCT GCGCAAAGAC ATCGACGCCG TCGCCGCGCG CCTCAAAGAT CGCTGTTACG TGCTCGACGT TGCCGGCTTT GCCGCACTCG AGGCGGAACG CAAGGCCATC CAGACCCGCA CCGAAGAGCT GCAGGCCCGC CGCAACAGCC TGTCCAAGCA GATTGGCATG CTCAAGGGCA AGGGCGAGGA CGCATCGGGC GTGATGGCCG AGGTGTCGGG CATCGGCGAC GAGCTGAAGG CGTCTGCCGC GCAACTCGAC GTGGTGCAGG CGAAGTTGCA GGACCTGATG CTGTCGATCC CGAACCTGCC GCACGAAAGC GTGCCGGCCG GACGCGACGA GACGCAGAAC GTGGAAGTGC GCCGCGAGGG CACGCCGCGC ACGTTCGATT TCCCGGTCAA GGACCACGTC GATCTGGGCG CCGCGCTGGG GCTGGATTTT GATGCGGGTG CCAAGCTGTC CGGCGCGCGA TTCACCGTCC TGAAAGGGCA GGTGGCGCGC CTGCATCGCG CGCTTGCGCA ATTCATGCTC GACACGCACA CGCTGGAGCA CGGCTACACC GAGGCATACG TGCCGTACAT CGTCAACGCT GCATCGATGC GTGGCACCGG TCAGTTGCCG AAGTTCGAGG AAGACCTGTT CCGCGTGCCG CGCAAGATGG GGCACAGTGC CGAAGGCGAA GACGGCGAAC GTGTCGAGAA CTTCTACCTG ATCCCGACCG CCGAAGTGCC GCTCACGAAC CTCGTGCGCG ATGAGATCGT CGCCGCCGAT GCGCTGCCGA TGATGTTCGC GGCGCATTCG CCGTGCTTCC GTTCCGAAGC CGGCTCGTAC GGCAAGGACA CACGCGGCAT GATCCGCCAG CACCAGTTCG ACAAGGTGGA GATGGTGCAG ATCGTGCAGC CCCAAACGTC GTTCGACGCG CTGGAAGCCA TGACGAACGC CGCGGAGAAC ATCCTGCGCA AGCTGGAATT GCCGTTCCGC ACCGTCGTGC TGTGCACCGG CGACATGGGC TTCGGCAGCA CCAAGACGTA CGACATCGAG GTGTGGATTC CGGCGCAGAA CACCTACCGC GAAATCAGCT CGTGCTCGAA CATGGGCGAC TTCCAGGCGC GCCGCATGCA AGCGCGTTTC CGCAACGCGC AGGGCAAGCC GGAGCTGGTT CACACGCTCA ACGGCTCGGG CCTCGCGGTG GGCCGTGCGC TGGTTGCCGT GCTGGAGAAC TACCAGAATG CGGATGGCTC GGTCACGGTG CCGACGGTGC TGCGCCCGTA CCTGGGAGGC CAGGAAGTGC TGAAACCGGC TGCTTGA
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Protein sequence | MLDIQLLRKD IDAVAARLKD RCYVLDVAGF AALEAERKAI QTRTEELQAR RNSLSKQIGM LKGKGEDASG VMAEVSGIGD ELKASAAQLD VVQAKLQDLM LSIPNLPHES VPAGRDETQN VEVRREGTPR TFDFPVKDHV DLGAALGLDF DAGAKLSGAR FTVLKGQVAR LHRALAQFML DTHTLEHGYT EAYVPYIVNA ASMRGTGQLP KFEEDLFRVP RKMGHSAEGE DGERVENFYL IPTAEVPLTN LVRDEIVAAD ALPMMFAAHS PCFRSEAGSY GKDTRGMIRQ HQFDKVEMVQ IVQPQTSFDA LEAMTNAAEN ILRKLELPFR TVVLCTGDMG FGSTKTYDIE VWIPAQNTYR EISSCSNMGD FQARRMQARF RNAQGKPELV HTLNGSGLAV GRALVAVLEN YQNADGSVTV PTVLRPYLGG QEVLKPAA
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