| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2121 |
|---|
| Symbol | |
|---|
| ID | 8019782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2261806 |
|---|
| End bp | 2262414 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644830903 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002982068 |
|---|
| Protein GI | 241663708 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGTCA TTCCCATTTC ACATGATCAA GAACCGGGCG CGGCAGCTTC GAAGAAGGAA
CTGACGCTGA CACGTAGAAG CATGCTCAAA GGTACCGGCG TGCTTGTGGG CACGTTGGCC
ATCGGCAGCC CGCTGGCGTT GCTGGCGCCG TCTACGGTGT GGGCTGTCGA GCTCAAGACG
CTGAGCAAGG CCGAGGGCGA CACGCTGCTG CAGATGGGGC GTGTACTGTT TCCCCACGCC
AAGCTGCCCG ACGCCGTTTA TGCACTGCTC GTGAAAGACC TGGATGCAAA AGCCGCTCAG
GACGCCCAGG CGGCCACGCA GTTGCACGAA GGTATTGCCG CGCTCGATAA GCTGGCTGGC
GGCAGTTTCA TCAAGGCCAG CGCAAAGAGG CGCCTGGCAG CGGTCAAGTC CATGGAAGGC
AAGCCCTTCT TCAACACGGT TCGAGGCCAG TGCGTGACCT CGCTCTACGA CAACGAAATG
GCGTTTGCCA CGTTCGGCTA CCCGGGATCG GCGTGGGAAA AGGGGGGCTA TATCACTCGC
GGCTTCCAGG ATCTGAAGTG GTTGCCAGCG CCCCCGGTGG AAGCGAGTCC GCCGCCTTTT
CTGGGCTGA
|
|---|
| Protein sequence | MKVIPISHDQ EPGAAASKKE LTLTRRSMLK GTGVLVGTLA IGSPLALLAP STVWAVELKT
LSKAEGDTLL QMGRVLFPHA KLPDAVYALL VKDLDAKAAQ DAQAATQLHE GIAALDKLAG
GSFIKASAKR RLAAVKSMEG KPFFNTVRGQ CVTSLYDNEM AFATFGYPGS AWEKGGYITR
GFQDLKWLPA PPVEASPPPF LG
|
|---|
| |