| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2108 |
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| Symbol | |
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| ID | 8019769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2252048 |
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| End bp | 2253178 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830892 |
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| Product | putative outer membrane protein (porin) |
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| Protein accession | YP_002982057 |
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| Protein GI | 241663697 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACA CACGCCTTCG ACCCTGCGTC CTGACCGCCA TTGCAGCCGC TCTCGGCTGC
GCAGCGAGTG GCGCCATCGC ACAATCGTCG GTCACCCTCT ACGGCACGGT CGATGCCGGC
CTCCAGTATC AAAACCGCAG TGCGGCCGGC GGCAGCATCA CCGAAGTGCA TTCAGGCGGC
ATCAGCCCGA GCATCTGGGG CCTCAAGGGG TCGGAAGACC TGGGCAGTGG GTTGAAGGCC
AACTTCAACC TCGAAGGGCA TTTCAGCAGC GACACCGGCA CGCTCACCAC CGGCCCCGGC
TTCAGCTCCG AGCTGTTCCG CCGGCAAGCG AACGTTGGCC TCAGCGGCAA CTGGGGAGCG
ATCACGCTTG GGCGCCAGTA CAGTCCGGCG CTCATCGGTA CGATCGGCAC GGAAGTGCGC
GGCTTCAAGG AGCAGTTCTC GAACCTGTAC GGCTGGGCCT ACAACCAGCT CCCCGCACCG
GGCAACGCAA TGGGCGCGGG CACCAACCCC GGCAACGACG TGGGCGTGTT CATCGGCAAT
GCACTGCAGT ACTCCAACAA CTTCGGCCCC GTGTGGCTGG GCGTTGCGTA TTCATTTGGA
GAGACTGCCG GCAGCTTCAG GCGCGGCAAT GAACTCTCGC TGGGTGCCAC CTACACGGGC
CCGGCCACAG TTGGCCTCGG CTATCAGTCG ACGGCAGACA GCGGCACGGG CGAGACCCTC
AGCCGCCTGT GGAGCGCAGG TGTGGCCGTA CCGTTCGGCG CCTTTACGGG CCGCGTGAAC
TACATCGGCG TTACCAATAA CGCGCCGACC GGCCAACGTG TGTCAGACGT CAAATCGATC
GGTGCCGGGC TCGACTACAA GTGGAGCCCC GCCAATACCG CCACGCTGGC GGGCTACTAC
AGCAAGTACG AAAGCAGCAC CCACGACAGC TCTACCAAGT CGGTCGTGCT GAGCAACGAC
TACGCCTTCT CCAAACGCAC CACGCTTTAC GCGCAACTTG TGTACGTCAA TGCGGGCGCA
GTGGGCACGG TGGACCCGCT GGAAAGTCTC AAGACTTCCA TCGTTGCGGG CGGTACGGCG
CCGGGCGCGA AGACAGTGCT GGCGGGTGTG GGGCTGAAGC ATTCGTTCTG A
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| Protein sequence | MQNTRLRPCV LTAIAAALGC AASGAIAQSS VTLYGTVDAG LQYQNRSAAG GSITEVHSGG
ISPSIWGLKG SEDLGSGLKA NFNLEGHFSS DTGTLTTGPG FSSELFRRQA NVGLSGNWGA
ITLGRQYSPA LIGTIGTEVR GFKEQFSNLY GWAYNQLPAP GNAMGAGTNP GNDVGVFIGN
ALQYSNNFGP VWLGVAYSFG ETAGSFRRGN ELSLGATYTG PATVGLGYQS TADSGTGETL
SRLWSAGVAV PFGAFTGRVN YIGVTNNAPT GQRVSDVKSI GAGLDYKWSP ANTATLAGYY
SKYESSTHDS STKSVVLSND YAFSKRTTLY AQLVYVNAGA VGTVDPLESL KTSIVAGGTA
PGAKTVLAGV GLKHSF
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