Gene Rpic12D_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2106 
Symbol 
ID8019767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2249869 
End bp2250816 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content65% 
IMG OID644830890 
Productbeta-lactamase domain protein 
Protein accessionYP_002982055 
Protein GI241663695 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.105061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAC GCCACCAACA GTTGGGCCTT CTGCTGTGTC TTGCGATGTT GACAGCCATC 
GCGCGCGCGC AGAACCCCGA TTACCACCTC GTACCGCACG CGGTTGCGCC CGGCATCTGG
GTGCTCGAAG GCGCCAACGC GGATTTCTCT GCGCGCAACG GCTGCAACAT CATCAACACC
GGCTTCATTG ATACCGGCGA TGGGGTGCTC GTCATCAACA CGGGGCCGTC GATGCTGTAC
GGCGAGCAGC AACGCCAGGC CATCCGCACG GTCACCTCGG CGCCGGTGCG CTGGGTGTTC
AACCTGAACT TGCACCCGGA CTATTTTTTC GGCAACCAGG CCTATGCGGA TGTCGGTGCC
CAGGCGCTGC CCGGCACCAT CGCCGGTGCG CAACGCGAGG GCGCGGCCTA CGCCGACAAT
CTTTACCGCA TCTGCGGCGC GTGGATGCAG AACACGGTAT CGACACCGCC CGGCACGCCA
TTGACCCCTG GCACACGCAC CATGGGGCAC CATCGCATCG ACCTGATCCG CCTCGACGGA
CATACCGATG ACGATCTTGT GTTAGTGGAC CGGACCAGCG GTGTGGTCTT CGCAGGCGGC
ATTGCCTTTC GAGACCGGAT TCCCACCACA CCGCACGCCA ACATTGCGCA TTGGCTGGCC
AGTCTCGATC GGTTGCAGAA GATCGTTGCC GACAGCGGCG CGCGCGTGTT GATCCCCAGC
CACGGGCCCG CGCTGGGCAA GGCGGACGCC ATCGCGCAGA CACGTCAGTA CCTGCAGTGG
CTCGATGCGC GTATGCGCCG CTCAGCGGCA GAAGGACGCG ACCTGGCAGA GGTGATTGCG
ATGCCGGTAG ACGCGCCCTA CGCGCTGTGG GGTGGAATGC CCGCGGAGTA CGTGCGCAAC
GTGACCCGCT TCTACCCACG TTACGAGAAC GCCGCGCTGG CGCCCTGA
 
Protein sequence
MSRRHQQLGL LLCLAMLTAI ARAQNPDYHL VPHAVAPGIW VLEGANADFS ARNGCNIINT 
GFIDTGDGVL VINTGPSMLY GEQQRQAIRT VTSAPVRWVF NLNLHPDYFF GNQAYADVGA
QALPGTIAGA QREGAAYADN LYRICGAWMQ NTVSTPPGTP LTPGTRTMGH HRIDLIRLDG
HTDDDLVLVD RTSGVVFAGG IAFRDRIPTT PHANIAHWLA SLDRLQKIVA DSGARVLIPS
HGPALGKADA IAQTRQYLQW LDARMRRSAA EGRDLAEVIA MPVDAPYALW GGMPAEYVRN
VTRFYPRYEN AALAP