Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2106 |
Symbol | |
ID | 8019767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2249869 |
End bp | 2250816 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644830890 |
Product | beta-lactamase domain protein |
Protein accession | YP_002982055 |
Protein GI | 241663695 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.105061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGAC GCCACCAACA GTTGGGCCTT CTGCTGTGTC TTGCGATGTT GACAGCCATC GCGCGCGCGC AGAACCCCGA TTACCACCTC GTACCGCACG CGGTTGCGCC CGGCATCTGG GTGCTCGAAG GCGCCAACGC GGATTTCTCT GCGCGCAACG GCTGCAACAT CATCAACACC GGCTTCATTG ATACCGGCGA TGGGGTGCTC GTCATCAACA CGGGGCCGTC GATGCTGTAC GGCGAGCAGC AACGCCAGGC CATCCGCACG GTCACCTCGG CGCCGGTGCG CTGGGTGTTC AACCTGAACT TGCACCCGGA CTATTTTTTC GGCAACCAGG CCTATGCGGA TGTCGGTGCC CAGGCGCTGC CCGGCACCAT CGCCGGTGCG CAACGCGAGG GCGCGGCCTA CGCCGACAAT CTTTACCGCA TCTGCGGCGC GTGGATGCAG AACACGGTAT CGACACCGCC CGGCACGCCA TTGACCCCTG GCACACGCAC CATGGGGCAC CATCGCATCG ACCTGATCCG CCTCGACGGA CATACCGATG ACGATCTTGT GTTAGTGGAC CGGACCAGCG GTGTGGTCTT CGCAGGCGGC ATTGCCTTTC GAGACCGGAT TCCCACCACA CCGCACGCCA ACATTGCGCA TTGGCTGGCC AGTCTCGATC GGTTGCAGAA GATCGTTGCC GACAGCGGCG CGCGCGTGTT GATCCCCAGC CACGGGCCCG CGCTGGGCAA GGCGGACGCC ATCGCGCAGA CACGTCAGTA CCTGCAGTGG CTCGATGCGC GTATGCGCCG CTCAGCGGCA GAAGGACGCG ACCTGGCAGA GGTGATTGCG ATGCCGGTAG ACGCGCCCTA CGCGCTGTGG GGTGGAATGC CCGCGGAGTA CGTGCGCAAC GTGACCCGCT TCTACCCACG TTACGAGAAC GCCGCGCTGG CGCCCTGA
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Protein sequence | MSRRHQQLGL LLCLAMLTAI ARAQNPDYHL VPHAVAPGIW VLEGANADFS ARNGCNIINT GFIDTGDGVL VINTGPSMLY GEQQRQAIRT VTSAPVRWVF NLNLHPDYFF GNQAYADVGA QALPGTIAGA QREGAAYADN LYRICGAWMQ NTVSTPPGTP LTPGTRTMGH HRIDLIRLDG HTDDDLVLVD RTSGVVFAGG IAFRDRIPTT PHANIAHWLA SLDRLQKIVA DSGARVLIPS HGPALGKADA IAQTRQYLQW LDARMRRSAA EGRDLAEVIA MPVDAPYALW GGMPAEYVRN VTRFYPRYEN AALAP
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