| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2103 |
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| Symbol | |
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| ID | 8019764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2244415 |
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| End bp | 2247036 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644830887 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002982052 |
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| Protein GI | 241663692 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0210734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATTCGC CTATCAGCCG TTCGGAGAAG AGCACCAGCC GTGTGCGCAA CGCCGCACCG
TGCCTTGCAG GCGGCGTGGC TGCGCTCACT GCCGCGGGGC TTTACTCGCC CGCGTTTGCC
GAAGACCAGA TCGTGGCGGT GGCATTGCCG ACCGCGGAGG TCGTCGGCTC GACCCCGATC
GACAGCATTG GCGTGCCGCT GTCGCAGTTT CCTGCCAATG CGCAGCGCGT GAGCGCGAAG
GATGCGCGCG AGCAACGCAA CTCCAACCTG GCGGACCTGC TCAACGACAA CCTGGGTCAG
GTGAGCATCA GCAACGGGTC GGGCAATCCG TACCAGAACG ACATCAACTA TCGCGGGTTT
CAAGTGTCGT CGCTGCTGGG CGTGCCGATT GGCGTGTCGG TCTACTTTGA TGGCGTGCGG
ATGAACGAGC CCTTCGGCTC CATCGTGAAC TGGGATCTGA TTCCCATGAA CGCGATGTCC
AGCGTCAACA TCCTGCCGGG CTCCAACCCG ATGTTCGGCC TCAACACACT GGGCGGCGCG
CTGGTCGTCA ACACCAAGAA CGGGAAGGAC AACGCCGGCA CGTCGATTGA GGCGCTGGGC
GGGTCGTTTG GCCGCCGTGC GCTGAGCTTT GAGACCGGTA TCGTCGACAA GGCACACAGC
ACCGATTACT TCGTCGCCGG CAACTTCGAC CGGCAGGACG GCTTTCGCGA TCACTCGGGT
TCGAACGTCA AGCAACTGTA TGGAAAAGCG CGGTGGCACG GCAACGACGG CGCTACCCAG
CTCGAGCTGT CGGCCGCACT GGCAGATACG TCGCTGAGCG GCACGCAGTC GTTGCCGATG
GACATGATGG CGAACCGCAG CGCCGCCTAT ACGTGGCCCG ACACCATCTC AAACCGGATG
GCGCTGCTGA ACCTGAAGGG CAGCCATTGG TTGAACGACA CCAACCAACT GGCCGGCAGC
GTCTACTACC GCAAGGCCAG CCTTCACAAC GTCAACAGCA ACGCACAGCT GGATGACGGC
TGCTTCAACG ACGACGGCTC GCTGGCAACG ACCGCTGCAG GTGGCACCAC CACGTACAAA
TGCGCGAACA AGGCGCCCAA CGGCACGGCA GTCAATGCAG TGACCGGCGC GAATGCGCTT
GCGCTCGGCT ACGGCCGCTG GACCAACGCC ATCAATACCA GCGTCGTCGA TTCCGCCACG
CATGAGGGCA CGGTGGGCTC GTCCCTGCAG TGGTCGAACT TCAGCCAACT TGCGGGACAC
GACAATACGT TCACCTTCGG TGGTGCGTTC GATCATTCGC GCATCACGTA TGACCAGACG
ACCTACCTGG CACGGTTGAT CAACTATCAG ACGGTGGTGA GCCCGAACCA GACATACGGA
TTCACCGCCA ATGGATCGGC ACCGTCGACA TCGAACCCGG CGTTGTTCAC GGGCAGCAAC
GTCATCGGCG CGGTCAACCT GTCGTCCAAC GTCAACAACT TCAGCCTGTA CTTCACCGAT
ACGTTGAGCG TGACGGAGAA GCTGAGCGTG ACTGCCTCTG GAAGCTTCAA CTACACAACG
CTCAACCAGG GCGGCGCCAA CAATAAATAC CTGAACGAAG ACGGCGGTTA CTCCTGGACG
GACCAAGTAT CGGGCGTGTC GTACCACAAC CCCGGCTACG CGAATGCCTA TCGGTACTCG
AATGCGGGAT CGGGCGCGGC AACCGCTCCG AACGGTGTCC CGCCGGGGGC GGTGGCCGGA
CCGGAAACCA ACAGCCTGGC CGGCTCGCAT CGCTATCGCC GTTTCAACCC GGCGCTCGGG
TTCAACTACG ACCTGGGCGC GGGGCAGGGC ATCTTCGGCA GCTACAGCGA ATCGATGCGC
GCTCCGACAT CGATTGAATT GTCTTGCGCC GATCCGAACA GCCCGTGCTC GCTCCCCACG
GGGTTCAACG GCGATCCGGA CCTGAAAGCC GTGGTAGCCA AAACCATCGA ATTCGGCGGC
CGCGGAAAGC TGGGCAAGTC CACCTACTGG AGCGCGGCTG TCTACGACTC GCGCCTGAGC
AATGACATCC AGTTCATCGC CACGTCAAAC ACGTACGGCT ACTTCGCCAA TGTCAGCAAG
ACCGAACGGC GCGGCATGGA ACTGGGCGCC AGCACGAAGA TCGACAAGTG GTCGTTGTCG
GCCAACTTTG GTTATGTCGA TGCGATCTAC AAGTCGGCAT TCACCACAGC GAGCGGGCAG
CATGTGGTCA GCGGCAACAA GATCCCGGGC ATCCCCGCGA AGACGCTCAA GCTCGGCGCG
TCGTACGCCT TCAGCCCGAA CCTGTCGATG GGCGGGAACG TGATCCTGGT CAGCAAGCAG
ATCGCGCACG GCAACGAAAG CAATGCCGAC CCGAACGGCG AGGTGCCGGG CTACGGCCTC
GTCAATCTGA ACCTGCATTA CAAGCCGACG AAACATCTCG AGATTTCGGC GTACATCAGC
AACCTGTTCA ACAAGCGCTA TTCCACGTAC GGCCTGTCGG GCATGCGGAG CATCTACACG
TTGGCGAAGC AGCAGTTCAT GACGCCGGCA CCGCCGCGCG CGATCTGGAT TGGCCTGACG
TATTCGTTTG GAGGCAAGGC CGCCGGTGCC GATGCGGACT GA
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| Protein sequence | MHSPISRSEK STSRVRNAAP CLAGGVAALT AAGLYSPAFA EDQIVAVALP TAEVVGSTPI
DSIGVPLSQF PANAQRVSAK DAREQRNSNL ADLLNDNLGQ VSISNGSGNP YQNDINYRGF
QVSSLLGVPI GVSVYFDGVR MNEPFGSIVN WDLIPMNAMS SVNILPGSNP MFGLNTLGGA
LVVNTKNGKD NAGTSIEALG GSFGRRALSF ETGIVDKAHS TDYFVAGNFD RQDGFRDHSG
SNVKQLYGKA RWHGNDGATQ LELSAALADT SLSGTQSLPM DMMANRSAAY TWPDTISNRM
ALLNLKGSHW LNDTNQLAGS VYYRKASLHN VNSNAQLDDG CFNDDGSLAT TAAGGTTTYK
CANKAPNGTA VNAVTGANAL ALGYGRWTNA INTSVVDSAT HEGTVGSSLQ WSNFSQLAGH
DNTFTFGGAF DHSRITYDQT TYLARLINYQ TVVSPNQTYG FTANGSAPST SNPALFTGSN
VIGAVNLSSN VNNFSLYFTD TLSVTEKLSV TASGSFNYTT LNQGGANNKY LNEDGGYSWT
DQVSGVSYHN PGYANAYRYS NAGSGAATAP NGVPPGAVAG PETNSLAGSH RYRRFNPALG
FNYDLGAGQG IFGSYSESMR APTSIELSCA DPNSPCSLPT GFNGDPDLKA VVAKTIEFGG
RGKLGKSTYW SAAVYDSRLS NDIQFIATSN TYGYFANVSK TERRGMELGA STKIDKWSLS
ANFGYVDAIY KSAFTTASGQ HVVSGNKIPG IPAKTLKLGA SYAFSPNLSM GGNVILVSKQ
IAHGNESNAD PNGEVPGYGL VNLNLHYKPT KHLEISAYIS NLFNKRYSTY GLSGMRSIYT
LAKQQFMTPA PPRAIWIGLT YSFGGKAAGA DAD
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