| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2100 |
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| Symbol | |
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| ID | 8019761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2240789 |
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| End bp | 2242543 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830884 |
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| Product | PQQ-dependent dehydrogenase, methanol/ethanol family |
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| Protein accession | YP_002982049 |
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| Protein GI | 241663689 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGACAC TACGAGTGAT TGCACTTGCG GCTGCCATGG CGGCTGCAAG TGTTGCCGTG
CACGCGGCAA CGCCCCCCGT TACCGATGCC ATGATCGAGA ACGATGCGAA ATCGTCGAAC
GACGTGCTGA CCTGGGGCAT GGGTACGCAA GGGCAGCGCT TCTCGACGCT CACCAAGATC
AACACGAAGA ATGTCAGCCA GCTTGTACCG GCATGGTCGT TCTCGTTTGG CGGTGAGAAG
CAGCGCGGTC AGGAATCCCA GCCGCTGATC TACAACGGCA AGATGTTCGT CACGGCGTCG
TACTCGCGCA TCTATGCGAT CGACCTGAAG ACCGGCAAGA AGCTGTGGAA GTACGAGCAG
CGTCTGCCGG AGGGCATCAT GCCCTGCTGC GACGTCGTCA ACCGCGGCGC CGCGCTGTAC
GACAACCTGG TCATCTTCTC CACGCTGGAT GCGCAGCTGA TCGCGCTCAA TCAGGACACC
GGCAAGATCG TCTGGAAAGA CAAGATCGAG GACTACGCCG CCGGCTATTC AACGACCGCC
GCACCGCTGA TCGTGAAGGG CATGGTGCTG ACGGGCGTGT CGGGTGGCGA GTTTGGCGTG
GTCGGCCGTG TGGAAGCGCG CGATGCCAAG ACCGGCCAGT TGATCTGGTC GCGTCCGACG
GTCGAAGGCC ACATGGGCTA CAAGTACGAC AAGGATGGCA ACAAGACCGA GAACGGCATG
ACGGGCACGC TCAACGCGAG CTGGCCCGGC GAGACGTGGA AGACCGGTGG CGCATCGACG
TGGCTGGGCG GCACCTACGA CCCGCAGACC AACCTGGTCT ACTTCGGCAC CGGCAACCCG
GGACCGTGGA ACAGCCATCT GCGCAAGGGC GACAACCTGT ATTCGTCTTC CACGCTGGCC
ATCGACCCGG ACACCGGCAA GATCGTCTGG CACTACCAGA ACACCCCGAA CGACGGCTGG
GATTTCGACG GCGTGAACGA GTTCGTGACG TTCGACATGG ACGGCAAGCG CGTCGGCGGC
AAGGCCGATC GCAACGGCTT CTTCTACGTG AACGATGCCA AGACCGGCAA GCTGCTCAAC
GCGTTCCCCT TCGTGAAGGT CAACTGGGCA ACCGGCATCG ACCTCAAGAC CGGCCGCCCG
AATTACGCGT CGGACCACCG CCCCGGCGAT CCGGCCGAAG CTGCGGGTGA AGAGAAGAAG
GGCAAGTCGG TGTTTGCCGA GCCCGGCTTC CTGGGCGGCA AGAACCAGAT GCCGATGGCG
TACAGCCCGC AAACCGGCCT GTTCTACGTG CCCGCCAACG AATGGGGCAT GGACATCTGG
AACGAGCCCG TCAGCTACAA GAAGGGCGCG GCCTACCTGG GTGCCGGCTT CACCATCAAG
CCGCTCAATG AGGACTACAT CGGCGCACTG CGCGCGATCA ACCCGAAGAC CGGCAAGATC
GAATGGCAGA TCAAGAACAA CGCGCCACTG TGGGGCGGGG TGATGACGAC TGCCGGTGGC
CTGGTGTTCT GGGGCACGCC CGAAGGCTAT CTGAAGGCGG CCGATGCCAA GACCGGCAAG
GAGCTGTGGC AATTCCAGAC CGGCAGCGGC ATCGTCGCGC CGCCCGTCAC CTGGGAAGAC
AAGGGCGAGC AGTTCGTGGC CGTGGTGTCG GGTTGGGGTG GTGCAGTGCC GCTGTGGGGC
GGTGAAGTGG CCAAGCGCGT GAACTTCCTG GAGCAGGGCG GTTCGGTTTG GGTGTTCAAG
CTGCACAAGA ACTGA
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| Protein sequence | MRTLRVIALA AAMAAASVAV HAATPPVTDA MIENDAKSSN DVLTWGMGTQ GQRFSTLTKI
NTKNVSQLVP AWSFSFGGEK QRGQESQPLI YNGKMFVTAS YSRIYAIDLK TGKKLWKYEQ
RLPEGIMPCC DVVNRGAALY DNLVIFSTLD AQLIALNQDT GKIVWKDKIE DYAAGYSTTA
APLIVKGMVL TGVSGGEFGV VGRVEARDAK TGQLIWSRPT VEGHMGYKYD KDGNKTENGM
TGTLNASWPG ETWKTGGAST WLGGTYDPQT NLVYFGTGNP GPWNSHLRKG DNLYSSSTLA
IDPDTGKIVW HYQNTPNDGW DFDGVNEFVT FDMDGKRVGG KADRNGFFYV NDAKTGKLLN
AFPFVKVNWA TGIDLKTGRP NYASDHRPGD PAEAAGEEKK GKSVFAEPGF LGGKNQMPMA
YSPQTGLFYV PANEWGMDIW NEPVSYKKGA AYLGAGFTIK PLNEDYIGAL RAINPKTGKI
EWQIKNNAPL WGGVMTTAGG LVFWGTPEGY LKAADAKTGK ELWQFQTGSG IVAPPVTWED
KGEQFVAVVS GWGGAVPLWG GEVAKRVNFL EQGGSVWVFK LHKN
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