| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2092 |
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| Symbol | |
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| ID | 8019753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2233981 |
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| End bp | 2236011 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644830876 |
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| Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002982041 |
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| Protein GI | 241663681 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000637573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCTC ACGCGGCGCC CGGCCCGCGC GCTTCCGACA ACGCTCCGGC CACGCTCGGT
GACGCACCGC ACGATCAGCC CGAACTGATC GCGCAATCCC ACGAGCGATC CAAGTCGTAC
GGCCTGCGGC CCTACGAGTC GCCCGACTTC TGCCCGGTGC TGCACAGCGA GCTGAAGACC
GAGATCGAGC GCAGCCAGTC GCTGTTCACG CATGCGCTGC CCGTGATGGA GACGCTCTAC
AGCCAGATCG TCAACACGCA GAGCATGGTG ATCCTGACCG ATACGTCGGG CTTGATCCTG
CATTCGATGG GGGACGACGA TTTCCTCGCC CAGGCCAGCA AAGTGGCCCT GCAACCGGGC
GCGCTCTGGT CGGAAGCGAG TCGCGGCACA AACGCCATCG GCACGGCACT GGCCGATGGC
AAGCCCACGC TGGTCCACGG CTCCGAGCAC TACCTGCAGG CCAACCAGTT CCTCACCTGT
TCCTGTGCGC CGATCTTCGA TCCGTACGGC GCCACCGTGG GCGCGCTCGA CGTGACGGGT
GACCACCGCG GCTTCCACAA GCACACCATG GCATTGGTGC GCATGTCGGC GCAGATGATC
GAAAACCAGT TGTTTGCCAA CACGTTCCAG GACGTGGTCT GCATCCACTT CCACTCGCGC
CCGGAATTCA TCGGCACGTT GGTCGAGGGC ATTGCGGCGT TCACGCCGGC GGGGCGCTTC
CTGTCGGCCA ACCGGAGCGG CGAATTCCAG CTCGGTCTGT CGATCCGCGC GCTGCATGCC
CATACGTTTT CGTCGCTGTT CGGGTTGTCG ATGTCGCAGC TGACCGACCG TGAACGCACG
GCAGCGGCGG GCATCGTTCA GCTGCAACTG CCCAGCGGCG TGAAGGTGTT TGCGCGCGTG
GAATGGAAGC AGCTGGCGAA CCGCATGGTG GGCGGCGCGA TGGGCGCCGA CCTCTCCGGG
GACCGCGACA GGACGCCGCG CCGGGCCTAC ATCGAGCCCC CCCGGCAGCC CGCCAGCCTC
GAAGCGCTGG ACACCGGCGA CGCGCAGATT CAAACCGTGA TCGGCAAGCT GCGCAAGGTC
ATCGGCAAGG ACATCCCGGT CATGATCCTG GGCGAAACCG GCACCGGCAA GGAATTGCTC
GCGCGCGCCA TCCACGCCGA CAGCCCGCGC CACGCCGGCC CCTTCATCGC CGTGAATTGC
GCGTCGATTC CGGAAGCGCT GATTGAATCC GAACTGTTCG GCTACGAAGA AGGCGCCTTT
ACCGGCGCGC GCAAGAAGGG CGGCATCGGC AAGATGGTGC TGGCCAACGG CGGCACGCTG
TTCCTAGACG AGATCGGCGA CATGCCGCTG CACCTGCAGG CGCGCCTGTT GCGCGCGCTG
CAAGAGCGTG CGGTTTCGCC GCTGGGCAGC AGCAAGCTGA TCCAGGTGGA CGTGACGGTC
GTATGCGCGA CGCACCGCAA CATGCGGGAG ATGGTGGCCA GCGGGCAGTT CCGCGAAGAC
CTGTACTACC GCCTCAACGG GCTTGTCGTG CGGCTGCCCG CGTTGCGCGA GCGCACCGAC
CTCGATGTGG TGGCCGACAA GCTGTTGAAG CTCGAACAGG CCGACGCGCC GCCCATCAGC
GAAGCCGTCA TGCAGATGTT CCGCAGCTAC CACTGGCCCG GCAACATTCG CCAGCTCGGC
AATCTGCTGC GCACCGCCCG GCTGATGGCC GAAGGCGCTC CGGAAATCAC CGAAGACCAT
CTGCCGGACG ATTTTCTTGA AGACTGGCAG GCGCGGCATG GCGACCAGCC GGCTGCCAAC
GTGGCAGGGG CAGGGGCAGG CGCGGTGGCA GCGGCTGCGC CGCCTGTCGC TCAAACCGTT
GGCGGCACGC AGCCCAAGCG GCTGGCCGAC GTGGAGAGCA TGGCGATCAT GGCGGCCGTG
AAGGCGCACA ACGGCAACAT CTCCGCCGCT GCAAAGGCGC TCGGCATTTC ACGCAACACG
ATCTACCGCA GGATCGACGA AGCCGGCGGC TTGCCCTCAG ACACCGACTG A
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| Protein sequence | MTPHAAPGPR ASDNAPATLG DAPHDQPELI AQSHERSKSY GLRPYESPDF CPVLHSELKT
EIERSQSLFT HALPVMETLY SQIVNTQSMV ILTDTSGLIL HSMGDDDFLA QASKVALQPG
ALWSEASRGT NAIGTALADG KPTLVHGSEH YLQANQFLTC SCAPIFDPYG ATVGALDVTG
DHRGFHKHTM ALVRMSAQMI ENQLFANTFQ DVVCIHFHSR PEFIGTLVEG IAAFTPAGRF
LSANRSGEFQ LGLSIRALHA HTFSSLFGLS MSQLTDRERT AAAGIVQLQL PSGVKVFARV
EWKQLANRMV GGAMGADLSG DRDRTPRRAY IEPPRQPASL EALDTGDAQI QTVIGKLRKV
IGKDIPVMIL GETGTGKELL ARAIHADSPR HAGPFIAVNC ASIPEALIES ELFGYEEGAF
TGARKKGGIG KMVLANGGTL FLDEIGDMPL HLQARLLRAL QERAVSPLGS SKLIQVDVTV
VCATHRNMRE MVASGQFRED LYYRLNGLVV RLPALRERTD LDVVADKLLK LEQADAPPIS
EAVMQMFRSY HWPGNIRQLG NLLRTARLMA EGAPEITEDH LPDDFLEDWQ ARHGDQPAAN
VAGAGAGAVA AAAPPVAQTV GGTQPKRLAD VESMAIMAAV KAHNGNISAA AKALGISRNT
IYRRIDEAGG LPSDTD
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