Gene Rpic12D_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2088 
Symbol 
ID8019749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2230576 
End bp2231397 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content64% 
IMG OID644830872 
ProductMltA-interacting MipA family protein 
Protein accessionYP_002982037 
Protein GI241663677 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.928938 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGC CTTCGCGTGC CCCGCTCCGC CTTCTGCTCC GTCTTTCCTT GGTCTTGGTT 
AGCGCGTTGT CAATCAGCGC TGCCCAGGCA CAGACGGCCC CTGCCGCCAA CGCGGAAAAC
AACGCCGAAG CCAGCGACTG GAGCGTCGCT GTCGGCCCGG CGATTTACAT GTCACCCAAA
TATCCGGGCG CGAAATCCAG CTTTGTGTTT CCGTGGATCG ATCAGGAGAT CGAATACCGG
CATCGCTTCT TTTCCAAGGG GATGGACTTT GCAGGCGTGT ACCTCGCCAA CGACGACACA
TGGCAGGTGG GCGGCAACTT CCAGTTCGAC CCGACGTGGC GCCATGCGCA TGACGACGCG
CGCCTGAATG GTCTGGGCAA TGTCAACGCC ACGGTGCGCG CGAAGGCGTT CGCGCAGTAC
ACGGTGTCGT TCCTCACGCT GTCCACCGAT GCGGAGCAAG ACATCCTCGG CAACCGCCAG
GGGTTGATCG CCAACGCCGA TGCCTACGCG AGCGCGCCGG TCGGCCGCTG GCTGTTCAGC
CTTGGCACCG GCGTGTCGTG GACGAACGGT CAGTACACGC GTACGTTCTT TGGCGGGGAC
GATGGGCAGA GCGCGCGTTC GGGCCTGCCG GTATTTGCCA CGCATGCGGG GCTGCGCGAC
ATCCACTTCA ACGCCATCGT CACGTGCAAG CTCGATGATC GGTGGACGGC GAATGCGTCG
CTCACGGTGG CGCGGCTGCG TGGCGATGCG GCAGACAGTC CGATCACCCA GCGCCGCCAG
CAGACCACGG CCATGGCCTC GCTCACGTAC CGGTTCCGCT GA
 
Protein sequence
MPLPSRAPLR LLLRLSLVLV SALSISAAQA QTAPAANAEN NAEASDWSVA VGPAIYMSPK 
YPGAKSSFVF PWIDQEIEYR HRFFSKGMDF AGVYLANDDT WQVGGNFQFD PTWRHAHDDA
RLNGLGNVNA TVRAKAFAQY TVSFLTLSTD AEQDILGNRQ GLIANADAYA SAPVGRWLFS
LGTGVSWTNG QYTRTFFGGD DGQSARSGLP VFATHAGLRD IHFNAIVTCK LDDRWTANAS
LTVARLRGDA ADSPITQRRQ QTTAMASLTY RFR