Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2088 |
Symbol | |
ID | 8019749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2230576 |
End bp | 2231397 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644830872 |
Product | MltA-interacting MipA family protein |
Protein accession | YP_002982037 |
Protein GI | 241663677 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.928938 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTGC CTTCGCGTGC CCCGCTCCGC CTTCTGCTCC GTCTTTCCTT GGTCTTGGTT AGCGCGTTGT CAATCAGCGC TGCCCAGGCA CAGACGGCCC CTGCCGCCAA CGCGGAAAAC AACGCCGAAG CCAGCGACTG GAGCGTCGCT GTCGGCCCGG CGATTTACAT GTCACCCAAA TATCCGGGCG CGAAATCCAG CTTTGTGTTT CCGTGGATCG ATCAGGAGAT CGAATACCGG CATCGCTTCT TTTCCAAGGG GATGGACTTT GCAGGCGTGT ACCTCGCCAA CGACGACACA TGGCAGGTGG GCGGCAACTT CCAGTTCGAC CCGACGTGGC GCCATGCGCA TGACGACGCG CGCCTGAATG GTCTGGGCAA TGTCAACGCC ACGGTGCGCG CGAAGGCGTT CGCGCAGTAC ACGGTGTCGT TCCTCACGCT GTCCACCGAT GCGGAGCAAG ACATCCTCGG CAACCGCCAG GGGTTGATCG CCAACGCCGA TGCCTACGCG AGCGCGCCGG TCGGCCGCTG GCTGTTCAGC CTTGGCACCG GCGTGTCGTG GACGAACGGT CAGTACACGC GTACGTTCTT TGGCGGGGAC GATGGGCAGA GCGCGCGTTC GGGCCTGCCG GTATTTGCCA CGCATGCGGG GCTGCGCGAC ATCCACTTCA ACGCCATCGT CACGTGCAAG CTCGATGATC GGTGGACGGC GAATGCGTCG CTCACGGTGG CGCGGCTGCG TGGCGATGCG GCAGACAGTC CGATCACCCA GCGCCGCCAG CAGACCACGG CCATGGCCTC GCTCACGTAC CGGTTCCGCT GA
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Protein sequence | MPLPSRAPLR LLLRLSLVLV SALSISAAQA QTAPAANAEN NAEASDWSVA VGPAIYMSPK YPGAKSSFVF PWIDQEIEYR HRFFSKGMDF AGVYLANDDT WQVGGNFQFD PTWRHAHDDA RLNGLGNVNA TVRAKAFAQY TVSFLTLSTD AEQDILGNRQ GLIANADAYA SAPVGRWLFS LGTGVSWTNG QYTRTFFGGD DGQSARSGLP VFATHAGLRD IHFNAIVTCK LDDRWTANAS LTVARLRGDA ADSPITQRRQ QTTAMASLTY RFR
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