Gene Rpic12D_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2084 
Symbol 
ID8019745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2226929 
End bp2227504 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content66% 
IMG OID644830868 
Producttranscriptional regulator, MerR family 
Protein accessionYP_002982033 
Protein GI241663673 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCAT TCCTGACCAT CGCCCAGGTT GCAGAAGCCA CCGGCCTGTC GACGCATACG 
CTGCGCTATT ACGAGCGCAT CGGCCTGCTC GACAGCGTGC AGCGGCGCGA TAACGGCCAT
CGTGTCTTCC GTGCCGAAGA CATGACGTGG CTGGAGTTCC TGCTGCGCCT GCGCGATACC
GGCATGCCGA TCGCGCAGAT GCAGGCGTAC GCCGCGCTGC GGCGGCAGGG CGACAGTCTG
GACAGTGTGT CGGCGCGCCA ACGCCTGCTG GAGTTGCATG CGGCGGCGCT GGAAGCGGAG
CTGCGCGCGC GGGCCGAGAC GCTGGCCGTG CTGCGCGTCA AACTCGTTGT CTACGACGGC
ATCCGGGCAC GGATTGAAGC CGCGGAAGGC ACGGGAGGCG CGGAAGGCGC CAAGGGCTCT
GCTTCCTCAT CTTCCAAATC GAAGCGCAAG CCAAAACGCC AACCGAACGA GGACGCGCAT
GACCCCGACC ACCCACACCG CACAAGCCGC AAACCACGCC AACCTGCAGG ACGATCGCTA
CGCGCGGGGC TGGCAAAAAC TCAAGGAAGT CGATGA
 
Protein sequence
MTPFLTIAQV AEATGLSTHT LRYYERIGLL DSVQRRDNGH RVFRAEDMTW LEFLLRLRDT 
GMPIAQMQAY AALRRQGDSL DSVSARQRLL ELHAAALEAE LRARAETLAV LRVKLVVYDG
IRARIEAAEG TGGAEGAKGS ASSSSKSKRK PKRQPNEDAH DPDHPHRTSR KPRQPAGRSL
RAGLAKTQGS R