| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2075 |
|---|
| Symbol | |
|---|
| ID | 8019736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2211864 |
|---|
| End bp | 2213234 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644830861 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002982026 |
|---|
| Protein GI | 241663666 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4267] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.230838 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGCA TTGGTTTTGA GCTGCGCAAG ATGCTCAAGC GCGACAGCCT GCTCGGGCTG
CTGCGCGCCT ATACCTACGC CGGCATCATC AGCTCGGGGC CGTGGATTCT CTCCATCGTC
GGGATTCTGC TGATCGGTAT CCTGAGCCTG CCGTTCGTGG TTCCGGGCTC GCTCATCACG
CAGTTCCAGG TGTCGGTCAC CTATCTGATT GCGGTCAGCC TGATCCTCAC GGGGCCGCTG
CAGTTGGCGT TCACGCGCTT TACGTCCGAC CGCCTGTTCG AGAAGCGCGA CGACCTGATC
CTGCCCAACT ACCACGCCGT GTCGCTCGTG ATGACGCTGG TGGCGGGCGG ATTGGGTCTG
CTTGTCATCC TCTTTGCGTT CCCGCAGCAG TCGGCCATCT ACCGGTTGCT GATGCTGGCC
GGTTTCGTGG TCATGGCCAA TATCTGGATC GCCGTGATCT TCCTGTCGGG CATGAAGCAG
TACAAGGCGA TCGTGTGGAT CTTCCTGATC GGCTACACGC TCACCGTGCT GTTGGCGCTG
CTGTTCAACC GGCTGGGGCT GGAAGGGCTG CTGGCGGGGT TCGTGACGGG GCAGCTTTGC
CTGCTGATCG GCATGGCGGC GCTTATCTAC CGCAACTTCA GCGGGCGGCG TTTCCTGTCG
TTCGAGGTGT TCGACCGGCG ATTCGCGTAT CCGTCGCTCA TGCTGATCGG GCTGCTGTAC
AACCTCGGCA TCTGGCTCGA TAAGTTCATG TTCTGGTATG CGCCGGGCAC GGGCCAGCAG
GTGATCGGCC CGCTGAACGC GTCGGTCATC TACGACATTC CGGTGTTTCT TGCATACCTC
GGCATCATTC CCGGCATGGC CGTGTTCCTG GTGCGCATCG AGACGGACTT TGTCGAGTAC
TACGACGCGT TCTACGATGC CGTGCGCGGC GGCGCATCGC TCGAGCACAT CGAAGACATG
CGCAACACGA TGGTGCAGAC CATTCGCGCG GGCCTGTACG AGATCGTGAA GATCCAGGCC
ATGGCCGCGC TGGTGCTGTT CGCCGTGGGC GCCTCGGTGC TGCGCGCGCT GCAGATTTCC
GAGCTGTACC TGCCGCTGCT GTACGTCGAC ACCATTGCCG CGAGCTTGCA GGTGGTGTTC
CTGGGCGTGG TGAACATCTT CTTCTACCTC GACCGGCGCC GCGTGGTGCT GGCACTGACG
GCGGCGTTTG TGGCCCTCAA CGGCGTGCTG ACGTGGATTA CGTTGCAGCT CGGCCCGGCC
TGGTATGGAT ACGGATTTGC CGTGTCGCTG CTGCTGGTGG TGATGGCCAG CCTGGTGATC
CTCGATCGGA AGCTGGATCG GCTGGAGTAC GAGACATTCA TGTTGCAGTA A
|
|---|
| Protein sequence | MAGIGFELRK MLKRDSLLGL LRAYTYAGII SSGPWILSIV GILLIGILSL PFVVPGSLIT
QFQVSVTYLI AVSLILTGPL QLAFTRFTSD RLFEKRDDLI LPNYHAVSLV MTLVAGGLGL
LVILFAFPQQ SAIYRLLMLA GFVVMANIWI AVIFLSGMKQ YKAIVWIFLI GYTLTVLLAL
LFNRLGLEGL LAGFVTGQLC LLIGMAALIY RNFSGRRFLS FEVFDRRFAY PSLMLIGLLY
NLGIWLDKFM FWYAPGTGQQ VIGPLNASVI YDIPVFLAYL GIIPGMAVFL VRIETDFVEY
YDAFYDAVRG GASLEHIEDM RNTMVQTIRA GLYEIVKIQA MAALVLFAVG ASVLRALQIS
ELYLPLLYVD TIAASLQVVF LGVVNIFFYL DRRRVVLALT AAFVALNGVL TWITLQLGPA
WYGYGFAVSL LLVVMASLVI LDRKLDRLEY ETFMLQ
|
|---|
| |