| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2071 |
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| Symbol | |
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| ID | 8019732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2207519 |
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| End bp | 2208211 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830857 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002982022 |
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| Protein GI | 241663662 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0750406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.438523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATC TCATCCAAAC CTACGGTATC TATTACCTGA TCGGCCAGTA CCCGAATGGG
CCGCTGGGCG GTCTGGCGCT GACATTCCTG CTGGCGTCCG CCGGCCTTGT GCTCGCGCTG
CCGGCGGGCA TCATCCTTGG CCTGTGCCGC GTCAGCCCGA TTGCCGCGCT GCGCTGGCCG
GCCACGGCGC TCGTCTACGT GGTCCGCGGT ACGCCGCTGC TGATGGTGAT CTTCTGGGCG
TATTTCCTGC TGCCCTCCGT TACTGGCCAG CGCACGGACC AGTTCAGCAC CATGTTGACC
GCGCTGGTGA TTTTCGACGG CGCGTATCTG GCGGAGATCG TGCGTGCGGG CATCCAGGGG
TTACCGCGCG GGCAGATGGA GAGTGCCCGC TCGCTCGGCC TGTCGTACAT GCAGGCGATG
CGCCGCGTGA TCCTGCCGCA GGCGCTGCGC AACATGCTGC CTTCGCTGGT CAATCAGCTC
GTGTCGACCA TCAAGGAAAC CTCGCTGGGT TATATCATCA GCCTGCCCGA GGTGTCGTTC
GTGGCCGGGC AGATCAGCAC CGCCGTGATG GTCAAGTCTG CCGAGGTGTA CGGCCTGCTC
GGCATCAGCT ACTTCATCAT GTGCTTTAGC CTGACGCGCG TGGCGTTTTA CCTGGAGCGC
CGCCTTGCCG CGCGTGCCCC GTCCAAACCA TGA
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| Protein sequence | MLDLIQTYGI YYLIGQYPNG PLGGLALTFL LASAGLVLAL PAGIILGLCR VSPIAALRWP
ATALVYVVRG TPLLMVIFWA YFLLPSVTGQ RTDQFSTMLT ALVIFDGAYL AEIVRAGIQG
LPRGQMESAR SLGLSYMQAM RRVILPQALR NMLPSLVNQL VSTIKETSLG YIISLPEVSF
VAGQISTAVM VKSAEVYGLL GISYFIMCFS LTRVAFYLER RLAARAPSKP
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