| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2070 |
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| Symbol | |
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| ID | 8019731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2206821 |
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| End bp | 2207516 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644830856 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002982021 |
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| Protein GI | 241663661 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0342054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.592732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAAT TTGATTTGTC GATGCTGCTC TCGGGGCAGT ATCACCAGTG GCTCGTCAGC
GGTTTCTTCC TGTCGATCAA GCTCTCCGTA CTGGCCTTCG TGTTGGCGCT GCCGCTTGCC
ATCACGGTCG CGCTGCTGCG CCTGGCGCCG GTCGCGCTGC TGCGCGGCAT CGGCCAGACC
TATGTCGAAG CCATCCGCAA CGTGCCGCTG CTTGCCCACA TGCTGTTCTG GTATTTCGGC
GCGCCGCAGA TCCTGCCGGA GTTCATCCGG GACTGGCTCT ACAGCATGAA CTACGAGGCC
GCGAGCGCCG TCATTGCGCT CGTGCTCTAC ACGGCCGCAT ATATGGCGGA GGACATACGC
AGCGGCATCC GCTCGATTCC CAAGGAACAG CTTGAAGCCA GCCGCGCGCT CGGGCTCTCG
TTCCTGCAGG CCATGCGCCT GGTGGTGCTT CCGCAATCGC TGCGCGTGAC GGTTCCTCCG
CTGGTCAGCC AAACGTTGAA CCTGTGGAAG AACTCCAGTA TCGCCATGGT CATCGGCGTG
GCCGAATTGA TGTACCAGGC GCAGCAGGTC GAGTCCGCCA CCTTTCGCGG CTTTGAGGCG
TTTGCGTTTG CCACCGCGGC CTATCTGACC ATCTCGATTG CGATCACGGT GTTCTCCGCC
TGGTATCAGC ATCGCTACCC CGTCCGAACG CTGTAG
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| Protein sequence | MPQFDLSMLL SGQYHQWLVS GFFLSIKLSV LAFVLALPLA ITVALLRLAP VALLRGIGQT
YVEAIRNVPL LAHMLFWYFG APQILPEFIR DWLYSMNYEA ASAVIALVLY TAAYMAEDIR
SGIRSIPKEQ LEASRALGLS FLQAMRLVVL PQSLRVTVPP LVSQTLNLWK NSSIAMVIGV
AELMYQAQQV ESATFRGFEA FAFATAAYLT ISIAITVFSA WYQHRYPVRT L
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