| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2069 |
|---|
| Symbol | |
|---|
| ID | 8019730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2205915 |
|---|
| End bp | 2206760 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644830855 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_002982020 |
|---|
| Protein GI | 241663660 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0404874 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.438523 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA ACCGACGTCT GACACAATTT GCCGGTGCCG CCATCCTGGC CGCGGCAACC
CTGGCCGCCA CCACCGCGCA CGCTGATCAA GTTTCCGACA TCAAGAAGAA GGGCGAGCTT
GTCTGCGGCG TGCTCGGCAC CGACGAGCCG TTCAGCTTCC TGAAGGACCC GATGAGCCGC
GAGATCGTCG GCTATGACGT CGACATGTGC GACGCCATCG CCAAGAGCCT GGGCGTCAAG
CCCGTGCTCA AGCAACTGGC CGTGGCCGCC CGCCTGCCCG AACTGCAGCA AGGCCGCGTG
GATCTGCTGG CAGCCTCCCT CACGCACAAC AAGGAGCGCG AGGCACAGAT CGACTTCTCG
GTGTCGACCT TCATCACCGG CCAGAAGGCC ATGGTGAAGA AGAGCAGCGG CATCACGTCG
CTCGCCCAGC TTGATGGCAA GAAGCTCCTG ACGGTCAAGG GTTCGACCAT GGAAGCCAAC
ATTGCCAAGA CCATCAAGAA CGCCGACGTT GTCTCGTTCG ACAACAGCCC GCAGGCACTG
CTGGCCCTGC AGCAAGGCAA GGGCGTCGCG TACGTGAACG ACGAAACCAC CCTGATCGGC
AACATGGCCA AGATGGGCCC GGCAGCCAAG GATTACGCGC TGCTGCCGCA GAACCTGTCG
ACCGAACATC TGGCGCTGGG CATCCGCAAG GGCGAGCCGG CCTTCAAGAA GCAGGTTGAT
GACGTGCTGC TCGGCATGGA AAAGAGCGGC GAGGCGCAAA AGCTGTTCGA CAAGTGGTTT
GGCCCGAACA CCAAGATGGC CTTCCCGCAG CGCACCTTCA AGATTTCTAC CGACAAGATC
GATTAA
|
|---|
| Protein sequence | MKTNRRLTQF AGAAILAAAT LAATTAHADQ VSDIKKKGEL VCGVLGTDEP FSFLKDPMSR
EIVGYDVDMC DAIAKSLGVK PVLKQLAVAA RLPELQQGRV DLLAASLTHN KEREAQIDFS
VSTFITGQKA MVKKSSGITS LAQLDGKKLL TVKGSTMEAN IAKTIKNADV VSFDNSPQAL
LALQQGKGVA YVNDETTLIG NMAKMGPAAK DYALLPQNLS TEHLALGIRK GEPAFKKQVD
DVLLGMEKSG EAQKLFDKWF GPNTKMAFPQ RTFKISTDKI D
|
|---|
| |