Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2066 |
Symbol | |
ID | 8019727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2203087 |
End bp | 2203782 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644830852 |
Product | 3-oxoacid CoA-transferase, A subunit |
Protein accession | YP_002982017 |
Protein GI | 241663657 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0689657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.794727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGTGA TCAACAAGCT TTGTCCGTCT GTGGAGGCCG CCCTGGCCGA TATCCCGGAC GGTGCCACCA TCATGATCGG CGGGTTCGGT ACCGCCGGCA TGCCCTCGGA ACTCATCGAC GGGCTGATCG CGCATGGCGC GCGTGAGCTG ACCATCATCA ATAACAACGC CGGCAATGGC GAGACGGGCC TGGCCGCACT GCTCAAGGCG CGCCGCGTAC GCAAGATCGT CTGCTCGTTC CCGCGCCAGG CCGATTCGTA TGTGTTCGAT GCGCTCTACC GTGCCGGCGA GATCGAACTG GAGCTGGTGC CGCAAGGCAA CCTGGCCGAG CGCATCCGCG CCGCAGGTGC CGGCATTGGC GGTTTTTTCT GCCCGACCGC CTACGGTACG CAATTGGCCG AAGGCAAGGA AACGCGCATC ATCGACGGCA AGCCCTACGT GTTCGAGCTG CCGCTGACTG CCGACTACGC TCTCATCAAG GCCCTGCGCG CTGATCGCTG GGGCAACCTC GTCTATCGCA AGACCGCGCG CAACTTCGGG CCGGTGATGG CGATGGCGGC CAAGTGCACC ATCGCGCAGG TCAGCGAGAC GGTGGAGCTG GGCGAGCTGG ATCCAGAGCA CATCGTCACG CCGGGTATTT TTGTGAAGCG CGTAGTCCAG CTCGCCGCCG CCCAACCCGC CAAGGAGGCC GCATGA
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Protein sequence | MHVINKLCPS VEAALADIPD GATIMIGGFG TAGMPSELID GLIAHGAREL TIINNNAGNG ETGLAALLKA RRVRKIVCSF PRQADSYVFD ALYRAGEIEL ELVPQGNLAE RIRAAGAGIG GFFCPTAYGT QLAEGKETRI IDGKPYVFEL PLTADYALIK ALRADRWGNL VYRKTARNFG PVMAMAAKCT IAQVSETVEL GELDPEHIVT PGIFVKRVVQ LAAAQPAKEA A
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