Gene Rpic12D_2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2061 
Symbol 
ID8019722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2198602 
End bp2199000 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content66% 
IMG OID644830847 
Product4-carboxymuconolactone decarboxylase 
Protein accessionYP_002982012 
Protein GI241663652 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR02425] 4-carboxymuconolactone decarboxylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATC GCGAACGCTA CGCCGCGGGC ATGGAAGTGC GCCGCGCCGT GCTGGGCGAT 
GCCCACGTCG ACCGGGCCAA CGCCGCGCAG ACCGAGCTGA CGGCTCCGTT TCAGGACCTC
ATCACGCGCT ACGCCTGGGG TGAAATCTGG ACACGCCCCG GCTTGCCGCG CCACACGCGC
AGCCTGCTGA CGATCGCCAT GATGGTCGCC CTCGGCCGCG ACGGCGAGTT GCGCCTGCAC
CTGCGCGCTG CCGCCAACAA CGGCGTTACG CGCGACGAGA TTCAGGAAAC GCTGCTGCAG
ACCGCAATCT ACTGCGGTGT GCCGGCGGCC AACCATGCGT TCCATCTGGC ACAGACGGTG
TTTGCCGAGA TGGATGCGGA GAGCGCTGCG AAAAAGTAA
 
Protein sequence
MDDRERYAAG MEVRRAVLGD AHVDRANAAQ TELTAPFQDL ITRYAWGEIW TRPGLPRHTR 
SLLTIAMMVA LGRDGELRLH LRAAANNGVT RDEIQETLLQ TAIYCGVPAA NHAFHLAQTV
FAEMDAESAA KK