Gene Rpic12D_2058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2058 
Symbol 
ID8019719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2195849 
End bp2196622 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content65% 
IMG OID644830844 
ProductABC transporter related 
Protein accessionYP_002982009 
Protein GI241663649 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCC CCACGATCCA TCCTCCGCCC ACATTGAGCA CGCGTGGCCT GTCCAGGCGC 
TGGGGCGGCT TTCACGCCAA TTCCGATATC TCGCTGTCTT TTGCGCCCGG CGCGCGCCAC
GCGCTGATCG GGCCGAACGG CGCGGGCAAG ACAACCTTCA TCAATCTGCT CACCGGCACG
CTCGCACCCA CTGCGGGCCA AGTGCTGCTG GATGATGAAG ACATCACCCG CCTGCCCGCA
CACCAGCGCG TCAAGCGCGG CATCACGCGC ACTTTCCAGA TCAACACGTT GTTTCCGGGA
TTGACGGTGC TGGAATCGGT GATGCTCGCC ATCTTCGAGC GCACGGGCGC GTCGTGGCAT
TGGCATCGCA CCGTTGCATC GCATAAGGAC GCCCGCGACG AAGCGATGGC ATTGCTGTGC
CGCTTGCAAC TCGGTGCCGA CGCGCTGGCG CCCACGCATG CGTTGCCTTA CGGCAAACAG
CGCCTGGTGG AGATCGCCCT GGCGCTCGCG ACGCACCCAC GCATCCTGCT TCTCGACGAG
CCTGCCGCCG GTATCCCAAG CGGACAAAGC ACCGAACTGT TCGAGGTCAT CGCCAGCCTG
CCGCGCGACA TCACGATCCT CTTCATCGAG CACGACATGA ACCTTGTCTT CCGCTTTGCC
GAGCGGATCA CCGTGCTGCT GGCCGGCCGC GTGCTGACTG AAGGCACGCC GCAGGAGATC
GCGGCCGACC CGCGTGTGCG CGAGGTCTAC CTCGGGGAGG TTGAGCATGC GTGA
 
Protein sequence
MTAPTIHPPP TLSTRGLSRR WGGFHANSDI SLSFAPGARH ALIGPNGAGK TTFINLLTGT 
LAPTAGQVLL DDEDITRLPA HQRVKRGITR TFQINTLFPG LTVLESVMLA IFERTGASWH
WHRTVASHKD ARDEAMALLC RLQLGADALA PTHALPYGKQ RLVEIALALA THPRILLLDE
PAAGIPSGQS TELFEVIASL PRDITILFIE HDMNLVFRFA ERITVLLAGR VLTEGTPQEI
AADPRVREVY LGEVEHA