Gene Rpic12D_2057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2057 
Symbol 
ID8019718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2195155 
End bp2195856 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID644830843 
ProductABC transporter related 
Protein accessionYP_002982008 
Protein GI241663648 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAAC TGTTGTCGCT CGAAAATGTG ACCGCCGGCT ACGGCAATGC TGTCGTGCTG 
GACGATGTGT CGTTCGCCCT CGAAGCAGGC GGCAGCCTTG CGCTGCTGGG CCGCAATGGT
GTCGGCAAGA CCACGCTGCT CGCCACGCTG ATGGGCTTCA CGCGCCTGCA CTGCGGGCGT
ATCCGCTGGC TGGGCGTGGA TATCGCCAAG GTGCCGCCAC ACCGGCGTGC CCGCGCAGGG
CTCGGCTGGG TGCCGCAGGA GCGGTGGATG TTTCCGTCGC TGACGGTGGA AGAGCATCTG
TCAGCCGTGG CGCGACCCGG GGCCTGGGAT GTGGCGCGCG TCTACAAGAC GTTTCCGCGC
CTTCAAGAGC GGCGCCGCAA TCTCGGCAAT CAGCTCTCAG GCGGCGAGCA GCAGATGGTC
GCCATCGCTC GCGCGCTGAT GACGAATCCC GCACTGCTGC TGTTGGATGA ACCGATGGAA
GGCCTCGCAC CGATCATCGT GCAGGAGCTT GGCCGCGCTA TCCGCGCGCT CGTTGAGGAG
GGGGGTATGG CGGTGATCCT GGTGGAGCAG CATGCGCGTC TGGCGCTGCA GCTCACGCAG
CGTGCGCTGG TGCTCGATCG AGGCCGCGTC GTGCACGCAT CAGCCAGCGC CGATCTGCTG
GCCGATGCGC CGTTACTGCA ACGGCTCGTG GCTGTTGCGT AG
 
Protein sequence
MRELLSLENV TAGYGNAVVL DDVSFALEAG GSLALLGRNG VGKTTLLATL MGFTRLHCGR 
IRWLGVDIAK VPPHRRARAG LGWVPQERWM FPSLTVEEHL SAVARPGAWD VARVYKTFPR
LQERRRNLGN QLSGGEQQMV AIARALMTNP ALLLLDEPME GLAPIIVQEL GRAIRALVEE
GGMAVILVEQ HARLALQLTQ RALVLDRGRV VHASASADLL ADAPLLQRLV AVA