Gene Rpic12D_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2054 
Symbol 
ID8019715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2191523 
End bp2192749 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content64% 
IMG OID644830840 
Product4-hydroxybenzoate 3-monooxygenase 
Protein accessionYP_002982005 
Protein GI241663645 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR02360] 4-hydroxybenzoate 3-monooxygenase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.541897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCC AGGTCGCCAT CATTGGCGCA GGTCCGGCAG GCCTTTTGCT CGGACAGCTT 
CTGCACCGCA ACGGCATCGA CGCCGTCATC CTCGAAACCA AGAGCCGCGC GTACGTTGAA
GAGCGCATCC GCGCCGGCGT GTTGGAGCAA GGCACGGTCG ACGTGCTCAA CGAAGCGGGC
GTGGGCGAGC GCATGAGGCG CGAGGGGCTT GTGCACCACG GTATCGACCT GCTGTTTGGT
GGCAAGCGCC ATCGCATCGA CCTGACGGCG ATGTCGGGCG GCCGCTCGAT CACGGTCTAT
GGGCAGCACG AGGTGGTGAA GGATCTGATT GCCGCACGTG TGGAGCAAGG CGCGCCGCTG
TTGTTCGATG TGAGCGAGGT GTCGGTGCAC GATATTGAGT CGGCCACGCC TTCGGTGCAG
TTCGTCCACG ACGGCGTGCC GCAGACATTG CAATGCGATT ACATCGCCGG ATGCGATGGC
TTTCACGGCA TCTGCAGGCA GGCGATTCCC GCGCAGCGGC AAGCGGTGTT CGAACGTGTC
TATCCGTTTG CGTGGCTTGG CATCCTGGCG GAAGCCGAAC CGGCGGCGGA AGAGCTGATC
TACGCAAATC ATGATCGCGG CTTTGCGCTG TTCAGCATGC GCTCTCCCAA GATCACGCGG
CTTTACCTGC AATGCAAGCC GGACGAGAAC CTCGCTGAAT GGTCGGATGC GCGCATCTGG
GACGAACTGC ACACGCGCCT GGAAACCAAC GACGGCTGGC GGCTGAAGGA AGGCCCGATC
CTGCAGAAGA GCGTCACGCC GATGCGCAGC TTTGTCTGCG AGACGATGCA GTACGGGCGC
CTGTTCCTGG CGGGCGACGC TGCGCACATC GTGCCGCCTA CCGGCGCGAA AGGCATGAAC
CTCGCCGTTG CCGACGTGCG CGTCCTAGCC CAGGCGCTCA CGGCACGCTA CAAGCAGAAC
GACACCACCC AGCTTGCAGG CTACGCCGAG CGCTGCCTGC AACGCGTCTG GCGCGCGGAG
CATTTCTCGT GGTGGATGAC GTCGATGCTG CATCGCTTTG ACGACCACAC GCCGTTCATG
CAGAAGCTGC AGCGCGCCGA GCTGGACTAC GTAACCAGTT CGGCGGCCGG CGCTCGCGTG
CTGGCCGAAA ACTACGTCGG CTTGCCGTTT GTCGACGCCC CCGCCGGCGC GTCGTTGAGC
ATCGTCAGTA ATTCCAGGGC GGCGTAG
 
Protein sequence
MRTQVAIIGA GPAGLLLGQL LHRNGIDAVI LETKSRAYVE ERIRAGVLEQ GTVDVLNEAG 
VGERMRREGL VHHGIDLLFG GKRHRIDLTA MSGGRSITVY GQHEVVKDLI AARVEQGAPL
LFDVSEVSVH DIESATPSVQ FVHDGVPQTL QCDYIAGCDG FHGICRQAIP AQRQAVFERV
YPFAWLGILA EAEPAAEELI YANHDRGFAL FSMRSPKITR LYLQCKPDEN LAEWSDARIW
DELHTRLETN DGWRLKEGPI LQKSVTPMRS FVCETMQYGR LFLAGDAAHI VPPTGAKGMN
LAVADVRVLA QALTARYKQN DTTQLAGYAE RCLQRVWRAE HFSWWMTSML HRFDDHTPFM
QKLQRAELDY VTSSAAGARV LAENYVGLPF VDAPAGASLS IVSNSRAA